Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00055 ATGGAGAACACCAAACATCAAGAAACTAACCGCGGCTACGACAAATACAGcaagaacaagagaaagaaatcgACAAGGTGTGAGGTTGCTGTGATTTCCACAATGGAATCGAGCGCCCACGTAGAAGACAGTTCCAGTAACTGTAAGCTAGTGGCCACAATTTCACACGGTTCTATATCGGTGATCGGTCGGCGGAGGGCCATGGAGGACGCTGTTAAAGTGGTTCCGGGCTTCATAGAGTCGGAACATAATTCTGGGGGCTATGATTTCTTCGCGGTTTATGACGGTCACGGTGGTACCACGGTGGCGAATGCTTGCCGTGACAGCATGCACTTGTTGCTGGCGAAGGAATTAAAGGAGGGGTGGTCAGGTGAAGGCGAAGATGAAGGAAATTCCAAGGAGCTGGATTGGCACGAGGTCATGTCTTCATGTTTCAGGAAGATGGACCAGAAAATTGGTGGCGGCAATCATGATGAGACGTTGGGCTTGGAGGGAAACAGCATGGGTTCAACGGCGTTGGTGGTAATGGTTGGAAAGGAGGAGATTGTGGTGGCTAACTGCGGAGATTCCAGAGCGCTCTTGTGCCGTGACGGCGTGGCAGTCCCACTTTCACGTGATCACAATcCTGATCTTCCAGATGAAAGGGAAAGAATAGAAGCAGCAGGTGGAAGAGTCATAAATTGGAACGGTAATCGTGTCTTAGGTGTACTTGCAACTTCAAGATCCATAGGAGATCACAGTGTGAAGCCATATGTAATATCGGAGCCAGAGGTGAAAGTGTATGACCGAACAGAGTCAGACGAGTTCGTTGTAATAGCTAGTGATGGTCTATGGGATGTGGTGTCCAATGATTTTGCATGCGAAGTGGCCAAGAGATGCCTCGATAGTCAGATGAGAACCTTCAGAGACGGCTTCATTAACTGTTACGCGGCAGAGGCTGCAGCTTTATTAGCCGAATTGGCCATGGCTCGTGGAAGCAAAGACAATATCAGTGTTGTAGTTGTCCATCTCAAGACTTCAACTTG 1025 0.479 MENTKHQETNRGYDKYSKNKRKKSTRCEVAVISTMESSAHVEDSSSNCKLVATISHGSISVIGRRRAMEDAVKVVPGFIESEHNSGGYDFFAVYDGHGGTTVANACRDSMHLLLAKELKEGWSGEGEDEGNSKELDWHEVMSSCFRKMDQKIGGGNHDETLGLEGNSMGSTALVVMVGKEEIVVANCGDSRALLCRDGVAVPLSRDHNPDLPDERERIEAAGGRVINWNGNRVLGVLATSRSIGDHSVKPYVISEPEVKVYDRTESDEFVVIASDGLWDVVSNDFACEVAKRCLDSQMRTFRDGFINCYAAEAAALLAELAMARGSKDNISVVVVHLKTST 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00055 341 SMART PP2C_SIG_2 70 337 IPR001932 -
Bva08g00055 341 CDD PP2Cc 54 337 IPR001932 -
Bva08g00055 341 Gene3D - 49 341 IPR036457 -
Bva08g00055 341 SUPERFAMILY PP2C-like 48 338 IPR036457 -
Bva08g00055 341 Pfam Protein phosphatase 2C 57 330 IPR001932 -
Bva08g00055 341 SMART PP2C_4 45 335 IPR001932 -
Bva08g00055 341 ProSitePatterns PPM-type phosphatase domain signature. 90 98 IPR000222 GO:0043169
Bva08g00055 341 PANTHER ALPHABET, ISOFORM E-RELATED 10 339 - -
Bva08g00055 341 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 10 339 - -
Bva08g00055 341 ProSiteProfiles PPM-type phosphatase domain profile. 55 337 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00055 Bva-Chr8 304201 306318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00055 13 338 PP2C-type Phosphatase Gene Family AT2G29380 44.214 1.56e-81 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00055 K14497 - gmx:100813248 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00055 08 304201 306318 Bva08g00055 08 304201 306318 ECH