Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00045 ATGGAATTAATAGAGCAAAGTGACAGAGCGACTAGCCATGAAGACTGCAACAGAGATAGCGTATCTTGCTCGGGCGATGGAGTTGCTATTGAGTTTCCATTTGGTTTAAAAGGAGTCgacaatcaaaatcaaaatcaaagtaGCCGTGGATGTAGTTATCCTAAGTTCCAGCTTTCGTGCGATAAGCAGAGACAGACAATTGTTAACTTTCCCTATTCCGGAGATTTTGCTGTGAAATACATCAATTACGAGGACCAAACCATTCAGGTCAACGACCCCGCTCACTGCCTCCCAAAACGCTTCTTGCACGACAACGTCTCCCTTTCTGTCTCCCCATTCCAGTTGGACCGATCCGCCTACAATATTTATAACCTCACCATCCTTCGTTGCCCATCCAACATAACACGGTCATACCCTCTCGTAATTCCTTGCCTGAATGATTCCAGGCCCAACTACTCAGTCATAGCTATATGGCCGCCTATTGTTCCGTCAGTGTTTTCTGAATCGTGCCACGtgatttcttctatttcttatcCGGTTTCAAATTTGGCCATGTGGCCCTTCTGGCCCGATCTTACCGAGGATATCCAGTTGACGTGGAGCGAGCCCGCTTGCGGACGCTGTGCAGCGAGTGGCCAACGCTGTGGCTTTGTTAAGGACACCGGTCTTCGAGTTGGATGCTTTCCCAGATCCCATACCCGAGGTCTTTCAAGAAGTGCCAAATATGCGCTTAGCATAGGACTGGGATTACCTGGATTCTTGTGTTTGATTGGGCTTTTATGTTGTATGCGCAATAAGGTGAGGACATGGTCTGCTCAGCGTGGCCGCCCCAGCACTGAATTTCCTGACACAATTGCCCTTCGACCTTACCGTTTTGTAATGGGACTGGATGGGCaaacaattgaaaaatatcCCAAGACACATGTTGGTGAAAGTGGACGGTTGCCAAAACCCAACCACAATACCTGCTCAATATGTCTTTCTGAATATCAGCCCAAGGAGACCTTGAGGACTATACCGGAGTGCAATCATTACTTTCATGCCATCTCACCACTGATTGCTGCTCCATTATCGGCTGCATTTGAGCGGACCAATGTGGAGCTGGCTTTGTCGGTCGCGAAAATTTTGGTCCAGTGCTCGAGGAAGTGGAGTGAAAGGGGTGCAGCAGTGCCTACAAAACTCCCTCAGCAGACGGATTG 1199 0.4679 MELIEQSDRATSHEDCNRDSVSCSGDGVAIEFPFGLKGVDNQNQNQSSRGCSYPKFQLSCDKQRQTIVNFPYSGDFAVKYINYEDQTIQVNDPAHCLPKRFLHDNVSLSVSPFQLDRSAYNIYNLTILRCPSNITRSYPLVIPCLNDSRPNYSVIAIWPPIVPSVFSESCHVISSISYPVSNLAMWPFWPDLTEDIQLTWSEPACGRCAASGQRCGFVKDTGLRVGCFPRSHTRGLSRSAKYALSIGLGLPGFLCLIGLLCCMRNKVRTWSAQRGRPSTEFPDTIALRPYRFVMGLDGQTIEKYPKTHVGESGRLPKPNHNTCSICLSEYQPKETLRTIPECNHYFHAISPLIAAPLSAAFERTNVELALSVAKILVQCSRKWSERGAAVPTKLPQQTD 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00045 399 Pfam RING-like zinc finger 323 347 IPR001841 -
Bva08g00045 399 SUPERFAMILY RING/U-box 322 348 - -
Bva08g00045 399 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 292 393 IPR013083 -
Bva08g00045 399 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 16 348 - -
Bva08g00045 399 Pfam Wall-associated receptor kinase galacturonan-binding 16 92 IPR025287 GO:0030247
Bva08g00045 399 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 16 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00045 Bva-Chr8 254823 260139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00045 20 348 C3H Transcription Factor Family AT2G25410 35.380 2.39e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00045 - - gmx:100810240 338.191