Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00034 ATGATAACGGAACGGAGGTGGTCAGGTAAACTTGAGTACCTCACTCGCAGTTACAGCGAGGGAAAGGGAATGACCACTTTTCCCGGGTTGATTTTTACTCTTTCCTCTCCCTCTTCAACTGCTCTTGTGGAAGACGATCCTTCTTCACCAGATGCACTTGCTGTTCAATCAGAACCCACCGCCAAAGACGCTAGAGATCAGATTCCTCATAGTGGTTGTAAGACATgtggaagagaagaaatagagaaaggaTGCAATGGTGAAGGAAGGATTCAAGGTGGGATTGCAACAATACCAGGATTTGGCTGGTGGCCTATAAAGGCTTACAGGCCATGTCCTGGATTTGTGGCCTCTGGTGGTAGGTATAGGCGACAAGGACAAAGTATGAATGAAGTTGCCTTTGGACGCGGTGGTGACAAAGCTTCTGTAGGAACTGCATCGAGCCGCTGCGGCCATTCAGTTTTACTGTTTCAGTTTCAGGGGGTGTCTGCGTCTGCTACTATACTTGTTTTCGGTGTCAAAAACCAGAGTGCAGAAATAGATGCTGAAATCCGAACAAGAATCGAGAAAACTGTTCGAAGAATCCTTGAAGAATCAGACTTGAACGAGACGACAGAGTCCAAGATTAGGAAGCAGGCGTCCAAAGAGCTCGACCTCGACCTATCGGCGCCGCACTACAAAGCCTTGATGAAGCAGGTTGTAGAGTCTTTTCTCGAGGGAAAACAAGAGCAGCAGCATCAACAAGAGGAAAGTACCAAGCAATACGACGATGATGGCGATCTCGAATTTAGAGGGAAAACTTTGGTCTCTTTACGCGAATACTATAGAAAGGACGGCAAAGAACTTCCTAGTTCCAAAGGAATTAGTTTGACGGAGGAGCAGTGGCCAGCTTTAAAGAAGAACGTACCTGCCATTGAAAAAGCTACTAAGAAAATGGAGTCCGGCAGTACATA 953 0.4544 MITERRWSGKLEYLTRSYSEGKGMTTFPGLIFTLSSPSSTALVEDDPSSPDALAVQSEPTAKDARDQIPHSGCKTCGREEIEKGCNGEGRIQGGIATIPGFGWWPIKAYRPCPGFVASGGRYRRQGQSMNEVAFGRGGDKASVGTASSRCGHSVLLFQFQGVSASATILVFGVKNQSAEIDAEIRTRIEKTVRRILEESDLNETTESKIRKQASKELDLDLSAPHYKALMKQVVESFLEGKQEQQHQQEESTKQYDDDGDLEFRGKTLVSLREYYRKDGKELPSSKGISLTEEQWPALKKNVPAIEKATKKMESGST 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00034 317 MobiDBLite consensus disorder prediction 239 260 - -
Bva08g00034 317 Gene3D - 176 240 - -
Bva08g00034 317 MobiDBLite consensus disorder prediction 242 260 - -
Bva08g00034 317 PANTHER OS01G0235100 PROTEIN 33 147 - -
Bva08g00034 317 Gene3D Transcriptional Coactivator Pc4; Chain A 261 315 IPR009044 GO:0003677|GO:0006355
Bva08g00034 317 SUPERFAMILY ssDNA-binding transcriptional regulator domain 262 311 IPR009044 GO:0003677|GO:0006355
Bva08g00034 317 Pfam Transcriptional Coactivator p15 (PC4) 262 301 IPR003173 GO:0003677|GO:0006355
Bva08g00034 317 PANTHER OS01G0235100 PROTEIN 33 147 - -
Bva08g00034 317 SUPERFAMILY DEK C-terminal domain 187 240 - -
Bva08g00034 317 Pfam DEK C terminal domain 187 238 IPR014876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00034 Bva-Chr8 183543 189622 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Bva08g00034 DEK_C 1.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00034 - K25815 gmx:100305633 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00034 08 183543 189622 Bva08g00034 08 183543 189622 ECH