Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00025 ATGATCACAGAATCTTCACCGTCTCGTCTGCATGCCTCTGCCCACCATATGGAGCCTTCAACCCCTTTGGTATCCTTTCTTGAACGTGTGCAAGAAACCGCATTTAACACCTTGGGCAAAAACAAGTCTGATTTTGATCCAAAAACCTACGTGGACTTGCCATTGAAGTTCAGTTTGCCTGCTACAGAGGAGGCCTTCGATAAACTTGCTAGGTCTGCCGATGGCTCTGTATCCGTCAGCgatttcaattatttcataGAAACATACTTCGAAGGCGCAGGAGATGATCTGGAGTATTTGGAACCAGAAGATTTCGTTGCTGAGCCACCGGGTTTCTTGCCCAAGGTGGAGCATACGGAGGTGAGGGCCTGGGCACTTAAGGTCCATTCCCTTTGGAAAAAATTGAGTCGCAAAGTATCCACTCGGGTCAAAAATCAGCCCGACTTGCATACTTTGCTTCCTCTGCCCGCTTCTGTCATCATTCCTGGCTCACGCTTTCGTGAGGTCTATTATTGGGATTCCTACTGGGTGATTAGGGGCTTGCTAGTAAGCAAAATGTATAAGACTGCTAAAGCGATTGTGACTAACCTCATTTCTCTCATAGAAGAATATGGTTTCGTGCTTAATGGCGCTAGAACCTACTACACCAACAGGAGCCAGCCTCCCCTTTTAAGTGCTATGATTTTTGAGATATATAATAGCACTGGTGATATGGAATTGGTTAAACGAGCTCTACCTGCACTACGGAAAGAGTACGACTTTTGGAATTCAGAAATACATAGAGTGACCATTCGGGATACTCAAGGTTGCTCTTACACCTTAAATCATTATTATGCTATGTGGAACAAACCCAGGCCTGAATCTTCAATTATGGACAAGGCATCTGCTTCCACGCTCCCGAATGCTTCTGAAAAAGAACGTTTTTACCTTGAACTAGCCTCTGCTGCCGAATCAGGATGGGATTTCAGCACAAGGTGGATGAGAGATCCGTCAGATTTTACAACCTTGGCTACGACATCTATAGTACCTGTTGATTTGAATGCTTTTATACTCGGGATGGAACTGAATATTGCGTTCTTTGCAAAAGTTACTGGAGATAACGGAACTGCCGAACAATTCCTGGAATTTTCTGAGGCCAGAAAAAAGgcaattaattatgtattctGGAATGAAGACACGAAACAATGGCTTGATTACTGGCTTAGCAATAGCTCGCGCAAGGAAGATGAAGTTTGGGTAGCTCAGAACCagaatagaaatatatttgcTTCAAATTTCGTTCCTTTGTGGATGCATCCATTTTACTCAGATACTTCACTTGTGGGTAGAGTTGTGGAAAGCTTCAAAACTTGCGGGCTTCTACGTGCCGTCGGGATTGCAACTTCTTTGAGTGATTCAGGACAACAGTGGGACTTCCCAAACGGCTGGGCTCCACTTCAACACATGCTGGTGGAAGGTCTCGTAAAATCTGGATTGAAAGAAGCAAGGTCATTGGCCCAAGAAATTGCCCTAAGATGGATCACCACCAACTATATTTCTTACAAGAAAACGGGTGTCATGCACGAAAAATTCCACGTTGAGCATTGTGGGGAATTTGGAGGCGGGGGTGAATATTTGCCCCAGACTGGATTTGGGTGGTCGAACGGAGTTGTGTTGGCATTCTTGGAGGAGTTTGGATGGCCCCAACATCGgaatatagatta 1703 0.4381 MITESSPSRLHASAHHMEPSTPLVSFLERVQETAFNTLGKNKSDFDPKTYVDLPLKFSLPATEEAFDKLARSADGSVSVSDFNYFIETYFEGAGDDLEYLEPEDFVAEPPGFLPKVEHTEVRAWALKVHSLWKKLSRKVSTRVKNQPDLHTLLPLPASVIIPGSRFREVYYWDSYWVIRGLLVSKMYKTAKAIVTNLISLIEEYGFVLNGARTYYTNRSQPPLLSAMIFEIYNSTGDMELVKRALPALRKEYDFWNSEIHRVTIRDTQGCSYTLNHYYAMWNKPRPESSIMDKASASTLPNASEKERFYLELASAAESGWDFSTRWMRDPSDFTTLATTSIVPVDLNAFILGMELNIAFFAKVTGDNGTAEQFLEFSEARKKAINYVFWNEDTKQWLDYWLSNSSRKEDEVWVAQNQNRNIFASNFVPLWMHPFYSDTSLVGRVVESFKTCGLLRAVGIATSLSDSGQQWDFPNGWAPLQHMLVEGLVKSGLKEARSLAQEIALRWITTNYISYKKTGVMHEKFHVEHCGEFGGGGEYLPQTGFGWSNGVVLAFLEEFGWPQHRNID 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00025 567 Gene3D - 30 566 IPR012341 GO:0005975
Bva08g00025 567 PANTHER TREHALASE 18 565 - -
Bva08g00025 567 ProSitePatterns Trehalase signature 2. 469 478 IPR018232 GO:0004555|GO:0005991
Bva08g00025 567 Pfam Trehalase 44 559 IPR001661 GO:0004555|GO:0005991
Bva08g00025 567 PANTHER TREHALASE 18 565 IPR001661 GO:0004555|GO:0005991
Bva08g00025 567 PRINTS Glycosyl hydrolase family 37 signature 542 555 IPR001661 GO:0004555|GO:0005991
Bva08g00025 567 PRINTS Glycosyl hydrolase family 37 signature 462 478 IPR001661 GO:0004555|GO:0005991
Bva08g00025 567 PRINTS Glycosyl hydrolase family 37 signature 204 222 IPR001661 GO:0004555|GO:0005991
Bva08g00025 567 PRINTS Glycosyl hydrolase family 37 signature 341 358 IPR001661 GO:0004555|GO:0005991
Bva08g00025 567 PRINTS Glycosyl hydrolase family 37 signature 384 400 IPR001661 GO:0004555|GO:0005991
Bva08g00025 567 PRINTS Glycosyl hydrolase family 37 signature 274 291 IPR001661 GO:0004555|GO:0005991
Bva08g00025 567 PRINTS Glycosyl hydrolase family 37 signature 309 326 IPR001661 GO:0004555|GO:0005991
Bva08g00025 567 SUPERFAMILY Six-hairpin glycosidases 34 561 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00025 Bva-Chr8 138215 141807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00025 20 567 Trehalose Biosynthesis Gene Families AT4G24040 59.891 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00025 K01194 - gmx:547539 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00025 08 138215 141807 Bva08g00025 08 138215 141807 ECH