Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00023 atggattcTCCTTCTCCCCATACTCTGAGGAATACGCTCGAGACTCTCTCTTGTGCTAATGGCTGGTCTTACGCTATTTTCTGGCGTTTTGATCCGCGAAATTCCTTGTTGTTGACGGCGGCAGATGCTTACTATAACCGAGAGCAAATGGAAATGGACAATATGCTTGCACAGGTCCACGTGCTGGGTGAAGGAATTGTTGGTCAAGCTGCTTTCGCTGGAAACCACAGATGGATTATCTCGGATGAACGGAATTTGGCAGGAATGATTGCAAGTCAAGATCTACGCGACGACGATTCTGAATTGCGTCAACACTTCTTCTCTGGAATAAAGACAATTGCAATGGTATCTGTCAAACCATGGGGAGTGGTACAATTCGGATCCAAGCACAAGaTCTTGGAAAGATTAGACTTTCTGGAACAAACACAGAGAATATTCAGTGAGATGGAAGATGTTGGCCTGCTTGATCCATCAGACAGTGTAGCTTCACCATTGGATTGTGAAAATTATGATCTAAATGAATTGTTGTCATCCTTCATTTCCTCTGAAAATTCTTGTGATTGGAATCTCAACTCTTTTCATGATGACGGGGATGGGTCAGGAGAGCTAATTAGAAATGCTTATTCTTGGGCAAATGTTGATCATTTTTTCCCTCCCATATCCAAGAATCGTGAAGAAGGGATGGCTCCCGTACATGGagacttttcttgttttaatgaCCAATTGACTGCTGTCTCAGATGCTCAAATTGCATTATCGTGTTGGACTAACACCAATGATTTTTTAAAGACTAACTCTTCCATGGACAGTGTAGTCGCCACAAACGCCTGTCTAGGCACATTGAATGGCGAAGTTTCTCCCTTGTCTATATTGGAGCTACAACTGGTACCTGAAACAAGGACCCAAGATGTTGTAGACATGTGTGCAAACACGTTTGATTCCAACAAACTGACAGTTGAGAATCCTAGTGAGGATTCAGCATTGACCTCATTGTATGGCAAAAATGGACTGCTTGAACAAAGAGGGAcatttgaagataaaataggaaaatcaATGAATGATCAACATTCTCCTCAGTCTACTATTGCGACAGAAGATAATGTCACGGAAACATTAAGCCAACTGCATGGTTTCTCAAACAACTTAAAGCCAGTTGATATATGGGAGGATCTTTCTCAGTTCTGCTCCATGGATGATCTTTGTCAATGGTTTGATCCTTCTCCAGAAGATAGCACATGCGGAACAGTAACGGCATTGGATAACACCCTTTCTCAAACAATAGAATTTAATCCCACGTATTCCAGTCCGGTTGGAAGAGATGTCTTGAGTGGCGTTCCAGTAAACTCGGAGGGCCAGCACACATTTGCATCTATGCATATTTCTGACAGTACTAAACTTGATTTCAACTGTGTTCTAGCTGGTGACCGGTGGGGAAATATTCTCACACCAGTGGTGAATGCTACTACAGATTGTGGATTATCTGAATTCATATCAGAGTTGAATAATATTGGTAGACTGACTCGCACCCGAAAGGGCTTGTTTTCAGAGTTGGGTATTGAAGATCTTTTGAACGGTGCAGCAAATTCTAATTCTTTATATAGATCCAATCTTGAGGATCGATTATCGACCAATAAAAGGCAAAGGACAGATTATTCACCTGCAGCTGTTACTTGTTCTGGGGTTAAGGCAAACTCGATGCAGCCTGTGTCTAATTACCGTTTTGTAGACAAGCAAGAGACATTCCCAAAATCACAGGTAGGCTTGAGGACTGATGATAACCATAGTGTCAACAATGGGAAGGCTGTTCTTCCATCACAGCCTGAAAAGCCAGAGGAACTTACCAAGACCACCCGGAAGAGCTCTAAGACTTCTCGACCCCAACCAAAAGATCGTCAGCAGATCCAAGACAGCATTAAAGAGTTGAGAGGGATCATCCCCCATGGGGGAAAgTGTAGCATTGATTCTTTGTTGGATCGTACCATCAAATACATGCTTTTCCTACAAAGCATCGCTAAATATGCGGATAAGCTACAAGAAGGCAATGGATCGAAGCTCATTGAGGAGGGAAATGGAAATGGAGTAGTtctaaaagacaaaattgtgGGGGATAGCAAAAGTGGTGGTGGTTCTACATGGGCACTTGAAGTTGGGGGTCAAACGATGGTATGCCCAATTATAGTTGAGGACATGAGTTCACCTGGCCAAATGCTTATAGAGATGCTTTGTGAGGGCCAGGGATTTTTCCTTGAGATAGCAGACATAATCCGGAGATTTGGGTTGAATATCTTGAAAGGAAAGATGGAAATTAGGGAGGGCAAAATATGGGCCCGATTTATTGTTGAGGCGAAAAGACATGTAACAAGGGTAGATGTATTTTGGTTTCTTATCCAACTTGTACAGCAAACAAACAGCTCTGGTATGGACTCAGATTCTGCTAACAAGCCTAGTAATGGACCCGAGAACAGAGATGCCACTTGCATTGCCATGGTCATGACTGTAGATTG 2504 0.4177 MDSPSPHTLRNTLETLSCANGWSYAIFWRFDPRNSLLLTAADAYYNREQMEMDNMLAQVHVLGEGIVGQAAFAGNHRWIISDERNLAGMIASQDLRDDDSELRQHFFSGIKTIAMVSVKPWGVVQFGSKHKILERLDFLEQTQRIFSEMEDVGLLDPSDSVASPLDCENYDLNELLSSFISSENSCDWNLNSFHDDGDGSGELIRNAYSWANVDHFFPPISKNREEGMAPVHGDFSCFNDQLTAVSDAQIALSCWTNTNDFLKTNSSMDSVVATNACLGTLNGEVSPLSILELQLVPETRTQDVVDMCANTFDSNKLTVENPSEDSALTSLYGKNGLLEQRGTFEDKIGKSMNDQHSPQSTIATEDNVTETLSQLHGFSNNLKPVDIWEDLSQFCSMDDLCQWFDPSPEDSTCGTVTALDNTLSQTIEFNPTYSSPVGRDVLSGVPVNSEGQHTFASMHISDSTKLDFNCVLAGDRWGNILTPVVNATTDCGLSEFISELNNIGRLTRTRKGLFSELGIEDLLNGAANSNSLYRSNLEDRLSTNKRQRTDYSPAAVTCSGVKANSMQPVSNYRFVDKQETFPKSQVGLRTDDNHSVNNGKAVLPSQPEKPEELTKTTRKSSKTSRPQPKDRQQIQDSIKELRGIIPHGGKCSIDSLLDRTIKYMLFLQSIAKYADKLQEGNGSKLIEEGNGNGVVLKDKIVGDSKSGGGSTWALEVGGQTMVCPIIVEDMSSPGQMLIEMLCEGQGFFLEIADIIRRFGLNILKGKMEIREGKIWARFIVEAKRHVTRVDVFWFLIQLVQQTNSSGMDSDSANKPSNGPENRDATCIAMVMTVD 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00023 834 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 8 812 IPR043561 GO:0003700|GO:0006355
Bva08g00023 834 MobiDBLite consensus disorder prediction 611 626 - -
Bva08g00023 834 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 618 667 IPR011598 GO:0046983
Bva08g00023 834 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 631 673 IPR036638 GO:0046983
Bva08g00023 834 MobiDBLite consensus disorder prediction 585 634 - -
Bva08g00023 834 MobiDBLite consensus disorder prediction 585 602 - -
Bva08g00023 834 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 8 812 - -
Bva08g00023 834 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 49 146 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00023 Bva-Chr8 126721 130967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00023 619 811 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.850 5.98e-59 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00023 - - gmx:100798158 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00023 08 126721 130967 Bva08g00023 08 126721 130967 ECH