Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00021 ATGGACTCTGGCACTAGTTCGTCGGCACGCAAGCTCGACGTGGAGGGTGCTGATGTTGTGGAGAAGGATCCAACCGGACGATATGCACGATATGATGAAATGTTGGGGAAAGGAGCATTCAAGACTGTATATAAGGCATTTGATGAAGTCGATGGGATAGAAGTTGCCTGGAATCAAGTGAACATTGAGGATTTTTTGCAGTCACCGCAGCAATTGGAAAGATTATATTCTGAGGTTCATCTGCTAAAGTCATTGAAACATGAGAATATAATCAAGTTCTATAATTCTTGGGTGGATGATCAGAGCAAGACTCTCAACATAATAACAGAATTATTTACATCTGGAAGTTTGAGGCAATATCGAAAGAAGCATAAGAGTGTTGATATGAAGGCCATCAAGAACTGGGCAAGGCGGATTCTCCGAGGATTATGTTATCTGCATGGTCACAATCCTCCTATTATTCATAGagatttaaaatgtgataatatttttgttaacgGTAATAATGGAGAAGTTAAAATTGGAGATCTTGGGTTGGCAATTGTCATGCAGCAGCCTACTGCTCGGAGCGTCATTGGGACACCCGAATTTATGGCCCCAGATCTTTACGAAGAAGAATATAATGAACTTGTTGACATATATTCTTTTGGCATGTGTATTTTAGAAATGATCACCTGTGAGTACCCATACAGTGAATGTAAAAATCCGGCCCAGATATATAAGAAAGTAACCTTTGGTATAAAGCCTGCTGCCCTTGCTAAAGTGAATGATTCGCAAGCTAAGCAGTTTATAGAGAAGTGTTTGGTTCCAGCATCTATGAGATTACCTGCAACTGAACTTTTGAAAGATCCATTTCTTGCAACTGAATACTCAAAGGAGATCAGCCATGACGTACTGCTGCTGAATAATCCAGCTACTAAATTGGTGAATCCACCATTGTCGGAGCCACATCCCATGGAGATAGatccaaattttaaacatatttcacATGGCTCCTGtgagaaaattattgaagaaacTTCTCGTGTCCCAACTTGTGATTACACAAGGGTGACAGAGAATAATGAATTCAGGTTGAGGGGGGAGAAAAATGACGACAGTACAATCTCGTTAACTCTGCGTATTGCTGATACAAATGGTCGAGGAGCAAGGAATATACACTTCCCGTTCTATCTTAATCTTGATACAGCAACTTCAATTGCCGAGGAGATGGCAGAACATCTGGATCTGGCTAATGAGGATGTGGCTATTATTGCGGAGCTAATACACAGCATGATTATGAAGCTGGTGCCCAACTGTAAACCTTCATCTAGTTCTTCAATTGGGGCGGACCATTTATATGGACATTCTCCTGTTGTTGGGAATGCTGGATTATCATTGGACTGCCGATTGTCGTCACTgttgattgattttgatagTAAGCCAAGCaatgaggaagagaaagacagACAAGAATCTGAGATGTCAGCAGAGTGTGGGATGACAAATGGCTCTTGTGCAAAGAGTGTCGGACCTGATTATTCTATTGTGGATGAAAGTAGCGTCTTCAATGGCTCTAGTTTCAATTCAGATGTCAGGGCATATGATCAAGACGGTCAACTGAGTGAATTTAATGTTGGCGATTCAGGAAGCATTAATAATGGGTCGGAGAAGAACTCACCAGTCTCCTTCATGGATTCATCATGTTGTGATGTATCCAAAAACTTGGACATGTCGAACATCTGTGCACTTTCTCTGGTGGCTGACAAAGACCACTCGAATGAGCTGAAGTTGGAACTTGATGCAATAGAAACTCAGTATCATCAATGCTTTCGTGAGCTCGTGAAGATGAGGGATGAAGCGATGGAAAATGCCCGAAAGAGATGGATGACAAGGAATAAAATATCAGGCATTTG 1895 0.3963 MDSGTSSSARKLDVEGADVVEKDPTGRYARYDEMLGKGAFKTVYKAFDEVDGIEVAWNQVNIEDFLQSPQQLERLYSEVHLLKSLKHENIIKFYNSWVDDQSKTLNIITELFTSGSLRQYRKKHKSVDMKAIKNWARRILRGLCYLHGHNPPIIHRDLKCDNIFVNGNNGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPDLYEEEYNELVDIYSFGMCILEMITCEYPYSECKNPAQIYKKVTFGIKPAALAKVNDSQAKQFIEKCLVPASMRLPATELLKDPFLATEYSKEISHDVLLLNNPATKLVNPPLSEPHPMEIDPNFKHISHGSCEKIIEETSRVPTCDYTRVTENNEFRLRGEKNDDSTISLTLRIADTNGRGARNIHFPFYLNLDTATSIAEEMAEHLDLANEDVAIIAELIHSMIMKLVPNCKPSSSSSIGADHLYGHSPVVGNAGLSLDCRLSSLLIDFDSKPSNEEEKDRQESEMSAECGMTNGSCAKSVGPDYSIVDESSVFNGSSFNSDVRAYDQDGQLSEFNVGDSGSINNGSEKNSPVSFMDSSCCDVSKNLDMSNICALSLVADKDHSNELKLELDAIETQYHQCFRELVKMRDEAMENARKRWMTRNKISGI 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00021 631 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00021 631 Gene3D - 367 460 - -
Bva08g00021 631 MobiDBLite consensus disorder prediction 474 493 - -
Bva08g00021 631 MobiDBLite consensus disorder prediction 474 488 - -
Bva08g00021 631 SMART serkin_6 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00021 631 Gene3D Transferase(Phosphotransferase) domain 1 112 294 - -
Bva08g00021 631 Gene3D Phosphorylase Kinase; domain 1 14 110 - -
Bva08g00021 631 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 16 625 - -
Bva08g00021 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Bva08g00021 631 SUPERFAMILY Protein kinase-like (PK-like) 31 287 IPR011009 -
Bva08g00021 631 PANTHER WNK KINASE 16 625 - -
Bva08g00021 631 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 369 426 IPR024678 GO:0004674|GO:0005524
Bva08g00021 631 CDD STKc_WNK 27 286 - -
Bva08g00021 631 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00021 Bva-Chr8 118802 122389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00021 1 627 MAP Kinase Kinase Kinase AT5G41990 51.033 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bva08g00021 Pkinase 9.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00021 K08867 - gmx:100783717 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00021 08 118802 122389 Bva08g00021 08 118802 122389 ECH