Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00017 ATGGGAAGAATGGGAGCCAATCAAAGAACTTACTCGGCTAATCCCGCCGACTACAAGCTTCTCGAAGAGGTCGGCTATGGGGCCAGCGCCACTGTTTATCGTGCGATCTATCTTCCTTTGAATGAAGTTGTGGCTGTCAAGTGCTTGGATCTCGATCGCTGCAATAGTAATCTGGATGACGTACGTAGGGAGGCTCAAACTATGAGTTTGATAGATCATCCCAACGTTGTGAGGGCATATTGTTCATTTGTTGTTGAACAAAACCTTTGGGTGGTCATGCCATTCATGGCTGAGGGTTCTTGTTTACACCTCATGAAAATAGCATATCCTGATGGATTTGAGGAGGCAGCTATCGGATCTATCCTAAAAGAAACACTTGAGGCTTTGGAGTATCTTCACGAGCAAGGGCATATTCATCGTGATGTTAAGGCTGGAAACATACTACTTGATAGTAATGGGGAAGTAAAGCTTGCCGACTTTGGTGTTTCAGCTTGCATGTTTGATACGGGTGATAGGCAGCGATCTAGAAATACTTTTGTGGGAACCCCATGCTGGATGGCTCCAGAGGTACTGCAACCTGGAAGTGGTTATAATTCCAAGGCTGATATTTGGTCTTTTGGGATTACGGCATTGGAGTTGGCTCATGGTCATGCACCTTTTTCAAAATATCCTCCAATGAAGGTTCTTCTAATGACCATACAGAATGCCCCTCCTGGACTCGATTATGATCGTGATAAAAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTGAAAGATCAGACAAAGAGGCCATCAGCAGAGAAGTTATTGAAACACTCCTTCTTCAAACATGCCAAGCCTCCTGAGCTTTCtgtgaagaaattatttgctGATTTACCACCTCTTTGGAATCGTGTAAAAGCACTTCAGCTTAAAGATGCAGCTCAACTAGCTCTGAAGAAAATGCCTTCTGCAGAACAAGAAGCAATATCACtgAGTGAATACCAGCGAGGAGTTAGTGCATGGAACTTTGATATAGATGATTTGAAAGCTCAAGCTTCATTGGTACgggatgatgatgatgtagATGAGATGAGGgaagaatatgaaaacaaattctttACCAATTATAAGGCTGATGCAACTGATTCCCGGTCTGGTGttggaaaaaagaattcaGACAAGACACCTCAGGATGAGCTCACATCACAATTACGTGGCAATGATATACAACAGAGTGAATACTTGAACAAAAAGGGGAAGATTCCCGAAAATGATTTCCTGGAATCTGGAGgcccaaaaaatataatttggaaGAGAAATGGATCAAATACTGAAGCGACAACATCTACCACAGAGAAGGATACCGTACCAAGCATGATTAAAAGTCAATCACTGAAAAATCGACAAACTCAAAGCGGGCCACTGATGCCAGGCACTGTGCTTGGTCATTCTTTATCAGAAAGAGGGCGTCCATTTGAAAGatttgaaaatgaaaatcagcTGTCAGGTGATAAAAATAATCGTGAAGTACGGCGAGCTCCAAGCTTTAGTGGTCCATTGATGCTTCCAAACCGAGCTTCAGCAAATAGTTTATCAGCTCCAATAAAGTCTTCTGGAGGATTCAGAGATTCATTGGATGACAAGTCTAAGGCTAATCTTGTACAAATTAAGGGGCGATTCTCAGTAACATCAGAAAATCTAGATCTTGTGAAGGATATTCCTTTAAGTTCAGTTCCACGCCGATCCTCACAGGGATCGCCACTGAGGAAATCTGCTAGTGTTGGTGATTGGATGTTGGATTCTAAACCAATGCCTATTGGTCAGTCCCCTAAAGATGGTGCCAATGTCAATATTCCTCCCTCTCTTCTTATGCCTCACCTTCAGAATCTTTTCCAGCAGACATCCATTCAACAGGATCTTATaatgaatttgttaaattgCTTGCAACCAGCTGAGGCAGTTGATGcTTCTCAGAATGGAAAGTTGCCGCCACTACCTCGCAGTTCAGAAAACAATGGGAGTATTGATTCAGCAACTTCTGAGAGGGAACGGCTGCTGATAGTTAAAGTGTCAGAACTTCAGGGGAGGATGATCAATTTGACCGACGAACTGACTGCCGAGAAGTTAAAATATGTGCAGTTACAACAACAGCTAACTGCTCTCTCTTGTCGAGAACAAGGGGAGGAAGTTGTATG 2189 0.4089 MGRMGANQRTYSANPADYKLLEEVGYGASATVYRAIYLPLNEVVAVKCLDLDRCNSNLDDVRREAQTMSLIDHPNVVRAYCSFVVEQNLWVVMPFMAEGSCLHLMKIAYPDGFEEAAIGSILKETLEALEYLHEQGHIHRDVKAGNILLDSNGEVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKHAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKKMPSAEQEAISLSEYQRGVSAWNFDIDDLKAQASLVRDDDDVDEMREEYENKFFTNYKADATDSRSGVGKKNSDKTPQDELTSQLRGNDIQQSEYLNKKGKIPENDFLESGGPKNIIWKRNGSNTEATTSTTEKDTVPSMIKSQSLKNRQTQSGPLMPGTVLGHSLSERGRPFERFENENQLSGDKNNREVRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDLVKDIPLSSVPRRSSQGSPLRKSASVGDWMLDSKPMPIGQSPKDGANVNIPPSLLMPHLQNLFQQTSIQQDLIMNLLNCLQPAEAVDASQNGKLPPLPRSSENNGSIDSATSERERLLIVKVSELQGRMINLTDELTAEKLKYVQLQQQLTALSCREQGEEVV 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00017 729 Gene3D Transferase(Phosphotransferase) domain 1 99 326 - -
Bva08g00017 729 MobiDBLite consensus disorder prediction 430 476 - -
Bva08g00017 729 MobiDBLite consensus disorder prediction 379 402 - -
Bva08g00017 729 CDD STKc_OSR1_SPAK 17 279 - -
Bva08g00017 729 Gene3D Phosphorylase Kinase; domain 1 6 95 - -
Bva08g00017 729 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00017 729 MobiDBLite consensus disorder prediction 434 475 - -
Bva08g00017 729 MobiDBLite consensus disorder prediction 660 676 - -
Bva08g00017 729 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 724 - -
Bva08g00017 729 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Bva08g00017 729 SMART serkin_6 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00017 729 SUPERFAMILY Protein kinase-like (PK-like) 17 330 IPR011009 -
Bva08g00017 729 Coils Coil 695 715 - -
Bva08g00017 729 MobiDBLite consensus disorder prediction 655 676 - -
Bva08g00017 729 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 3 724 - -
Bva08g00017 729 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00017 Bva-Chr8 104062 113128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00017 8 724 MAP Kinase Kinase Kinase Kinase AT4G24100 65.647 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Bva08g00017 Pkinase 3.6e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00017 - - pper:18777880 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00017 08 104062 113128 Bva08g00017 08 104062 113128 ECH