Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02599 atgaaaattcaGTGCGATGTATGTGAGAAAGCCCCAGCAACGGTGATTTGTTGCGCGGATGAGGCAGCTTTATGTGCCAAATGCGACGTTGAAGTTCATGCTGTAAACAAGCTTGCAAGCAAGCACCAGAGGCTTCTTCTTCAATGCCTACCAAACAAGCTTCCAAGATGTGACATATGCCAGGATAAGGCGGCTTTCATATTCTGTGTTGAAGACAGAGCACTCTTGTGTCAAGACTGTGATGAACCAATTCATTCAGCTGGTAGCCTTTCTGCAAACCACCAGCGCTTTCTGGCCACAGGTATCCGTGTGCCACTGACTTGTAATTGTACCAAAGACAATGAAAAAAGCCCGTTGGGGTCACCTAATAGAAATGCACAGCAAATTGCTCCCAGACTTCCTTCTTATCAAGCATCTAGCTTCTCCTCGTCTTGGCCTGTTGATGACTTGCTGGAATTAACAGACTTTGAATCACCTGATAAGAAGGAATACCTTGAGTTTGGAGAGCTAGAATGGTTGGGAGACATGGGTCTTCTTGGTGAACAATTTACTCGGGAAACCTTAGCTGCTGCTGAAGTTCCTCAGCTTCCGGTGACACAAACCAGCAATGTTGCCTCATATAGATCCTCTAAGTCCTATAATGCTTACAAGAAGCCGAGGCTCCAAGTCCTAGACGAAGATGATGACGAGCACTTCACTGTGCCTGATCTTGGCTG 716 0.4581 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAVNKLASKHQRLLLQCLPNKLPRCDICQDKAAFIFCVEDRALLCQDCDEPIHSAGSLSANHQRFLATGIRVPLTCNCTKDNEKSPLGSPNRNAQQIAPRLPSYQASSFSSSWPVDDLLELTDFESPDKKEYLEFGELEWLGDMGLLGEQFTRETLAAAEVPQLPVTQTSNVASYRSSKSYNAYKKPRLQVLDEDDDEHFTVPDLG 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02599 238 CDD Bbox1_BBX-like 57 98 - -
Bva07g02599 238 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bva07g02599 238 Gene3D Classic Zinc Finger 1 95 - -
Bva07g02599 238 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 238 - -
Bva07g02599 238 SMART bboxneu5 52 99 IPR000315 GO:0008270
Bva07g02599 238 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bva07g02599 238 CDD Bbox1_BBX-like 5 47 - -
Bva07g02599 238 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Bva07g02599 238 Pfam B-box zinc finger 52 95 IPR000315 GO:0008270
Bva07g02599 238 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Bva07g02599 238 PANTHER B-BOX ZINC FINGER PROTEIN 24 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02599 Bva-Chr7 20494681 20497097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02599 1 161 Orphan Transcription Factor Family AT1G06040 63.529 6.55e-66 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Bva07g02599 zf-B_box 1.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02599 - - vun:114183169 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02599 07 20494681 20497097 Bva07g02599 07 20494681 20497097 ECH