Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02595 ATGGAATACCCTTTTACTCCCAAGGGGAAAGGAATTGGATATTGGACTTCTCCTCGAGCTCAGTTGGAGGGATTATCTGGCGgaataagaaattcaatttcagaGGACTTTTCAGAGCTCATGAGTTTTGATACTTATGCTGGTTGGTGCAACAGTTGGTCAGCAAATGAGCAGATTTTGGCTAATGGATTTTCATCATTTGCACCATACGCATCATCTGATGGATTCAATTTGGCGGAACAAAACAGTGGAGCATTCTTTATGACTGAAGTTAGTGGAAATTACAATACTATGGGGGAAAAAGTTGAATTTCAGCGAGTTGACACCCGATTTGTTAACGCTAATGACGCCAATAACTTGAATTCAGGACAAAATAATGGATCTTTTGAACAACTTAATACCTTAGACGTGGCCAGGTCACCTGGTTGGTCACTCGATGAGAGAATGCTGAAGGCTTTGTCCTTCTTCAAGGAATCCGCTGGTGGGGGAATATTGGCACAAGTTTGGGTACCCATAAAGCAGGGTGATAAGTTCATCTTAAGCACAAGTGAGCAACCCTATTTGCTAGACCAAATGCTTGCAGGGTACCGGGAGGTGTCTAGGGCATTTACATTCTCTGCAGAAGAAAAAACTGGTTCTCTCCCAGGACTACCTGGTCGCGTGTTTATCTCCAAAGTTCCCGAGTGGACTTCCAATGTCGTTTATTACAATAAGACGGAATACTTGAGGGTGGAGCATGCCATTGATCACGAGGTTCGTGGATCAATTGCTGTTCCAGTATTTGATCTTCACTCTGAAATACCATGCTCTGGTGTACTGGAACTTGTCACTACAAAGGAACAACCTGATTTTGATGGAGAATTGGAAATTGTTTGTCAAGCGCTTCAGGCTGTGAATTTAAGGACTACTATGCCTCCCCGACTTCTTCCCCAGTATGTCTCAAATAACAAACGAGCAGCTTTAACAGAGATAATGGATGTCTTACGAGCTGTGTGTCATGCACATAGATTGCCACTGGCATTGACATGGATCCCTTGTTGTTACACAGAGGGAATTGGTAATGAAATTAGGGGAATACGAATTAGAGAGGATAACACTAATTCTAGTGAGAAAGGTGTACTGTGCATTGAAGAATCAGCATGCTATATAACTGATAGACTGATGGAAGGATTTGTTCATGCATGTGTTGAACATCATCTTGAGGAAGGGCAAGGTATAGCTGGGAAAGCTCTTAAATCAAATCACCCGTTCTTTTATCATGATGTGAAGACATATGATATTACTGAATATCCACTTGTTCATCATGCACgcaaatataatttgaatgcGGCAGTTGCAATCAGGCTTAGGAGTACCTTCACTAAGGATGATGATTACATATTAGAATTCTTTCTACCTGTCAATATGAGAGGCAGTTCAGAACAGCAACTCTTATTAGACAACCTCTCAGGTACCATGCAGAGAATTTGTAGGCGCTTGAGGACAGTTTCAGATGCGGAATTATCAGGAAGGGAAGGTTCACAAGGAGGTTTCCAAACTGAAAAAGCTTCAGGTTTTTTGTTGATGTCCAGGAGAAACTCTCAAATAGCATTAACAGATTCAATCAGGAAGATGCCTAAGGCATCTAACTTGAGAAACAACGGAATTAAGGCTGTTCATAATCAGgttgagaaaaagagaagtacGGCGGAAAAGAATGTCAGCTTGAGTGTGCTCCAGCAATACTTTTCTGGTAGTCTGAAGGATGCTGCGAAGAGCATTGGTGTTTGTCCTACAACTCTAAAGAGGATATGTAGGCAACATGGCATTTCAAGATGGCCATCCCGTAAGATTAATAAAGCGAATCgttcattaaagaaaatacagaCTGTGCTTGACTCTGTTCAAGGGGTAGAAGGAGGGTTGAAGTTTGACCCCTCTACTGGGGGGTTTGTGGCAGGGAGTTCAATCATCCGAGAATTAGATGCTCATACAAGTCTTCTGTTCTCTGAGAAAAGAATGCATGTAAAAGGACCTGATCTTGTTACACAAGATGCAGTTGCAGTACCTCTAGTGCCTTGTACCGAACGTGATTATTCGGCGATTAAGGCGGAAGAACGTGATGTTTATTTAACATGTGGAAACCAACTCGTGCACTCGAGAAGCCGGAACTCTTGCGCGGGGGAATTGAAGAAAGTAAATGCTTCTTCTGTTGATTGTAGTGAAGATTCGAAGTCAATGGCCATTGATGATGGATCATGCTACACAGCACGCCATGGGACTAAGGATCAAGATTGTGCTGACTTGGCCTGTCTGGGTTCTGTTCTTGCAAAAGAAGGGGATAAATGGGGTCAGAACAAGGGCGATCTGGGATTAGAAAATGCTAACTGTGATATTGTCTCTCGGAGTTCAAGTCCCTTGATCGCCGGAGGAGTGGATGGGATTGTTGATCATAGCCGCCCTACTTATTCAAGCATGACAGGCTCATCAAATGGCTCTGGTTCAACGATGCATGATAGCTCATCGGGATCTCAGAGTTTTGAGAACCAGAAGCATTGCAAAGTCGAATCAACCTGTATTGATAGTATTAGTGGGTCAAAAATTATTGTGAAAGCTACTTACAGGGAAGATACCATTCGTTTCAAGTTTGATCCATCTGCAGGTTATTTGCAGCTATATGAAGAAGTTGCCACGAGATTGAAATTGCAACATGGGTCATTCCAGCTCAAATATCTGGATGATGAAGAGGAATGGGTGATGTTGGTAAATGACTCAGACTTGCAAGAATGTCTAGATATATTGGATGACATTGGCACTCGTAGGGTGAAGTTCCTTATTCGTGAGATGCCTCTTGTCTTGAGCAGCTCTGGTAGTAGCAGCTCATA 2864 0.4169 MEYPFTPKGKGIGYWTSPRAQLEGLSGGIRNSISEDFSELMSFDTYAGWCNSWSANEQILANGFSSFAPYASSDGFNLAEQNSGAFFMTEVSGNYNTMGEKVEFQRVDTRFVNANDANNLNSGQNNGSFEQLNTLDVARSPGWSLDERMLKALSFFKESAGGGILAQVWVPIKQGDKFILSTSEQPYLLDQMLAGYREVSRAFTFSAEEKTGSLPGLPGRVFISKVPEWTSNVVYYNKTEYLRVEHAIDHEVRGSIAVPVFDLHSEIPCSGVLELVTTKEQPDFDGELEIVCQALQAVNLRTTMPPRLLPQYVSNNKRAALTEIMDVLRAVCHAHRLPLALTWIPCCYTEGIGNEIRGIRIREDNTNSSEKGVLCIEESACYITDRLMEGFVHACVEHHLEEGQGIAGKALKSNHPFFYHDVKTYDITEYPLVHHARKYNLNAAVAIRLRSTFTKDDDYILEFFLPVNMRGSSEQQLLLDNLSGTMQRICRRLRTVSDAELSGREGSQGGFQTEKASGFLLMSRRNSQIALTDSIRKMPKASNLRNNGIKAVHNQVEKKRSTAEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKANRSLKKIQTVLDSVQGVEGGLKFDPSTGGFVAGSSIIRELDAHTSLLFSEKRMHVKGPDLVTQDAVAVPLVPCTERDYSAIKAEERDVYLTCGNQLVHSRSRNSCAGELKKVNASSVDCSEDSKSMAIDDGSCYTARHGTKDQDCADLACLGSVLAKEGDKWGQNKGDLGLENANCDIVSRSSSPLIAGGVDGIVDHSRPTYSSMTGSSNGSGSTMHDSSSGSQSFENQKHCKVESTCIDSISGSKIIVKATYREDTIRFKFDPSAGYLQLYEEVATRLKLQHGSFQLKYLDDEEEWVMLVNDSDLQECLDILDDIGTRRVKFLIREMPLVLSSSGSSSS 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02595 954 ProSiteProfiles PB1 domain profile. 860 942 IPR000270 GO:0005515
Bva07g02595 954 MobiDBLite consensus disorder prediction 812 840 - -
Bva07g02595 954 SMART PB1_new 860 942 IPR000270 GO:0005515
Bva07g02595 954 Gene3D - 857 939 - -
Bva07g02595 954 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 5 953 - -
Bva07g02595 954 SUPERFAMILY CAD & PB1 domains 855 941 - -
Bva07g02595 954 Pfam RWP-RK domain 566 613 IPR003035 -
Bva07g02595 954 ProSiteProfiles RWP-RK domain profile. 549 634 IPR003035 -
Bva07g02595 954 CDD PB1_NLP 861 941 IPR034891 -
Bva07g02595 954 Pfam PB1 domain 863 940 IPR000270 GO:0005515
Bva07g02595 954 MobiDBLite consensus disorder prediction 813 840 - -
Bva07g02595 954 PANTHER PROTEIN NLP8 5 953 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02595 Bva-Chr7 20471242 20477078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02595 1 952 NLP Transcription Factor Family AT2G43500 49.200 0.0 817
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bva07g02595 PB1 5.6e-16 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02595 - - aprc:113864503 1232.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02595 07 20471242 20477078 Bva07g02595 07 20471242 20477078 ECH