Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02588 ATGTCTGAGGGACCACATCTATCGAAATCAGCTGGCGGTTTCTGTAGATATGAGGCTTGTGCTCCACTTAGCAGGATGATGATGGATCATCAATCTGGTCATTCATTTGATTCAGATGAAAGTGACCTTGATATGCAAGTAGAGATTAGTGAAAAGCATGAGGAAATAGAAGATGAGCTTCCTAACAAACTGGAAATATGTGCAGTTGAAGGTGAAAAATTTGTAGAACAATCAGCTGAAAATATTTCAGCCAATGCGGAAGGTTTAGAACCATATGTCGGCATGGAGTTTAATTCAGGAGATGAAGCCAGAGAATTTTACATTGCCTATGGGAGACGGGTTGGTTTTACTGTACGAATACACCATAATAGTCGTTCACGAGTAAACAATCATGATATTGGTCAAGATTTTGTCTGCTCAAAAGAAGGATTTCGCACAAAAGGGTTGGCTTTACGGGATGGAGGAAAGTGGGTGGTCACCAAATTTGTGAAGGAGCATAGTCATAAACTGATGAGTCGTAGCAAAGTTCCATGGGGTGGATCTGGAAAGCACTTGGTTGGTGAGATAAGAGAATCCGTGAACTATCTCTTGAGTTGTACAATGAAGCAGAAATGCAAGCGACGTTGTGCTGCATATGAACAACAGTTAAATATGATTCTGAACGATTTGGAAAAACAGACAGAACACATCTCCAAAAAAGTTGCAGATATAGTGCAAAGTATAAGAGAGATCGAGGAGGAGAAATCGGATTCAGACTGTGGATACTGTGGGTTCGGCAGCATtccagaaaatgaaattta 800 0.4 MSEGPHLSKSAGGFCRYEACAPLSRMMMDHQSGHSFDSDESDLDMQVEISEKHEEIEDELPNKLEICAVEGEKFVEQSAENISANAEGLEPYVGMEFNSGDEAREFYIAYGRRVGFTVRIHHNSRSRVNNHDIGQDFVCSKEGFRTKGLALRDGGKWVVTKFVKEHSHKLMSRSKVPWGGSGKHLVGEKCKRRCAAYEQQLNMILNDLEKQTEHISKKVADIVQSIREIEEEKSDSDCGYCGFGSIPENEI 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02588 251 Coils Coil 194 214 - -
Bva07g02588 251 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 149 191 - -
Bva07g02588 251 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 149 191 - -
Bva07g02588 251 Pfam FAR1 DNA-binding domain 105 147 IPR004330 -
Bva07g02588 251 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 28 147 - -
Bva07g02588 251 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 189 237 - -
Bva07g02588 251 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 28 147 - -
Bva07g02588 251 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 189 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02588 Bva-Chr7 20444621 20448515 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva07g02588 FAR1 1.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02588 - - zju:107422095 302.367