Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02568 ATGGATTCAGATCTTCAGCAAAACCATACCGTATTTAATGAGCAGCTCCAGCAGCCGATGAATTCAAGCTTGACACGGCACCGATCGGCACCGAGTTCTTATTTTACGAATATCATTGACAAGGAGTTCTATGAGCACATTTTTAATCGCCCTTCCAGTCCCGAAACAGAGCGAGTCTTTTCGCGGTTTCTGAATAGTATTAGTGGTGGCGGCACTGAAGATTCGCTTGCTCCTCCTGTTCGACAAAATTCTGCAGTGAAGGAAGAGATTAATCAGCAGGCTCAGGTCATGCCATCCATGAATAATGAAACCGTGGTTCTTCGGCAGCAAaacaatatcattaattatagcTCTGctcctcaaattttttaccaaaGCTCAGGACGACCACCTTTGCCAAACATGACACCAGCGATGGAAGGAACATATTCTTTGGGAACAAATCGGTTGCCGCAGTTGAAGACTGGTGGCGGAAATTCTAATCTTATCAGGCATAGTAGTTCACCTGCTGGACTTTTTTTCCAAATAGACATTGAAAATGGCTTTGCTGCGGTTGAAGGCATGGGAACTTTTGGAACTGGTAATAACACCAATGAAGGAGCAAACTTTTCTTCTTCGAGGGGGTTAAAGAATCAGTCAAACTACTCGTCAGGGCCATTGTCGTCAATAGCTGGAATTGGAGACACAAGCAATAGGGAAAGCAATCCAGAAAACGAAGGTTTTGCTGAAAGCCATGTTGATGAATTCATGACAGGTTTCCCAGTGGGTCCTTGGGATGATGCTACAATCATGTCTGACAATATTACTGGTCTAAAAAGATTGAGAGATGATgatgcaaaaatattttctagtttAAATGCAGTTGAAACGCAGAATGAGACAAGAAGCCAGCCTGCTGCTCCTTTGGCTCATCACTTAAGTCTGCCAAAAACATCAGCGGAAATGGCAGCCATTGAAAAGTTTCTGCAGTTCTCAGAATCTGTTCCGTGTAAAATTCGTGCCAAGCGGGGCTGTGCCACTCACCCGAGAAGCATTGCGGAGAGGGTTAGGAGAACCAAAATTAGTGAGCGTATGAGGAAACTACAAGATTTGGTCCCGAACATGGACAAGCAAACCAACACAGCAGACATGTTGGATTTGGCTGTTGAGTACATCAAAGATCTTCAAAAGCAGGTTCAGACGCTTTCAGAGAGTCACTCTAAATGTACGTGTCCACACAAGCAGCCGCAATA 1232 0.4269 MDSDLQQNHTVFNEQLQQPMNSSLTRHRSAPSSYFTNIIDKEFYEHIFNRPSSPETERVFSRFLNSISGGGTEDSLAPPVRQNSAVKEEINQQAQVMPSMNNETVVLRQQNNIINYSSAPQIFYQSSGRPPLPNMTPAMEGTYSLGTNRLPQLKTGGGNSNLIRHSSSPAGLFFQIDIENGFAAVEGMGTFGTGNNTNEGANFSSSRGLKNQSNYSSGPLSSIAGIGDTSNRESNPENEGFAESHVDEFMTGFPVGPWDDATIMSDNITGLKRLRDDDAKIFSSLNAVETQNETRSQPAAPLAHHLSLPKTSAEMAAIEKFLQFSESVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQKQVQTLSESHSKCTCPHKQPQ 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02568 410 SMART finulus 344 394 IPR011598 GO:0046983
Bva07g02568 410 MobiDBLite consensus disorder prediction 1 30 - -
Bva07g02568 410 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 15 407 - -
Bva07g02568 410 MobiDBLite consensus disorder prediction 196 237 - -
Bva07g02568 410 Gene3D - 339 407 IPR036638 GO:0046983
Bva07g02568 410 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 341 404 IPR036638 GO:0046983
Bva07g02568 410 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 338 388 IPR011598 GO:0046983
Bva07g02568 410 Pfam Helix-loop-helix DNA-binding domain 343 389 IPR011598 GO:0046983
Bva07g02568 410 MobiDBLite consensus disorder prediction 196 239 - -
Bva07g02568 410 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 15 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02568 Bva-Chr7 20357037 20360210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02568 1 404 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 39.387 1.34e-76 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva07g02568 HLH 4.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02568 - - gmx:100803833 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02568 07 20357037 20360210 Bva07g02568 07 20357037 20360210 ECH
Bva09g00066 09 307848 311021 Bva07g02568 07 20357037 20360210 ECH
Bva04g02222 04 21230932 21233798 Bva07g02568 07 20357037 20360210 ECH
Bva13g02355 13 17900852 17903192 Bva07g02568 07 20357037 20360210 ECH