Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02564 ATGTAGCCTCCGTTGGTAGAGAAGGAAAgccttttaaatttaaggagAGAGAGACTGACAGAGAGAAGcgcatctctctctctctctcctcgcACTTCggctttgttttctctctcctcgTCGGTACCAAATCTACCAGGGATTCATATCCGATGCGATTCGGAGGTTATAGATCGAGCTGAAGGTTTCATTTCCcagattttttcttctcttcctggCAAACAGGGAAGTTTAAAAAGGATGGACCATGACAAGACGGGATGCCAAGCTCCCCCTGAAGGTCCTGTATTGTGCATCAACAACTGTGGATTCTTTGGGAGTGCAGCTACCATGAACATGTGTTCTAAGTGCCACAAAGACATGATGCTGAAACAGGAGCAGGCCAAGCTTGCAGCGTCATCCATTGGAAATATTATGAAGGGGTCATCAAGCAGCAGTGGAAATGAACCTGTTGTTGCTGCCAATGTGGATATCCCAATCAATTCAGTAGAGCCTAAAACTATCTCCGTGCAACCTTTATTTGCTTCAGGCTCAGAGGAGAATGCTGAGGCAAAGCCGAAGGATGGTCCAAAACGCTGCAGCAGCTGCAATAAGCGGGTTGGTTTGACAGGGTTCAGTTGTCGATGTGGTAACCTTTTCTGCGCTGTACATCGCTATTCAGACAAACATAATTGCCCGTATGATTACCGCACGGCTGCCCGGGATGCCATAGCTAAAGCAAACCCAGTTGTTAAGGCTGAGAAGCTTGATAAAATCTG 758 0.4142 MPPLVEKESLLNLRRERLTERSASLSLSPRTSALFSLSSSVPNLPGIHIRCDSEVIDRAEGFISQIFSSLPGKQGSLKRMDHDKTGCQAPPEGPVLCINNCGFFGSAATMNMCSKCHKDMMLKQEQAKLAASSIGNIMKGSSSSSGNEPVVAANVDIPINSVEPKTISVQPLFASGSEENAEAKPKDGPKRCSSCNKRVGLTGFSCRCGNLFCAVHRYSDKHNCPYDYRTAARDAIAKANPVVKAEKLDKI 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02564 251 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 80 251 - -
Bva07g02564 251 Gene3D - 80 147 - -
Bva07g02564 251 PANTHER AN1-TYPE ZINC FINGER PROTEIN 80 251 - -
Bva07g02564 251 SMART A20_3 94 118 IPR002653 GO:0003677|GO:0008270
Bva07g02564 251 ProSiteProfiles Zinc finger A20-type profile. 91 125 IPR002653 GO:0003677|GO:0008270
Bva07g02564 251 Pfam A20-like zinc finger 96 118 IPR002653 GO:0003677|GO:0008270
Bva07g02564 251 Gene3D - 172 247 IPR035896 -
Bva07g02564 251 SMART AN1_Zf_4 192 229 IPR000058 GO:0008270
Bva07g02564 251 ProSiteProfiles Zinc finger AN1-type profile. 186 232 IPR000058 GO:0008270
Bva07g02564 251 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 96 132 - -
Bva07g02564 251 SUPERFAMILY AN1-like Zinc finger 176 246 IPR035896 -
Bva07g02564 251 Pfam AN1-like Zinc finger 192 228 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02564 Bva-Chr7 20332662 20336245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02564 87 251 C2H2 Transcription Factor Family AT3G52800 44.509 5.60e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02564 - - gmx:100499857 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02564 07 20332662 20336245 Bva07g02564 07 20332662 20336245 ECH
Bva09g00073 09 348872 351576 Bva07g02564 07 20332662 20336245 ECH
Bva04g02212 04 21183581 21185605 Bva07g02564 07 20332662 20336245 ECH
Bva13g02367 13 17963582 17965492 Bva07g02564 07 20332662 20336245 ECH