Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02561 ATGGAAGCTAACGGGAAGGATGATCTTAAGATACCTCTGTTGCAGGGCCCACAAGATGCTGAAATGAGgacacttaaatttaaaataaaagatgtcaAGTGTGCATCTTGTGTAAATTCTATAGAATCTTTGGTTAGAAACCTTTCTGGCGTGAACAGCATAACGGTTTCACCACTAGATGGTCAAGCTGCAATCATATATGTGCCAAAGTTGGTTTCTgCGAACAAAGTAAAAGAAACATTACAAGCTGCAGGTTTCAGAGTTGATGGACTTCAGGAGAAGGACATATCCGTATGCCGATTCAGAATTAAAGGAATGGCATGCACAAGTTGCTCTGAGTCTGTTGAGCGTGCCCTTCAAATGGTTGATGGAGTGAAAAAAGCAGTGGTAGGCCTAGCTCTAGAAGAAGCAAAGGTGCACTTCGATCCTAACCTCACTGACACCAAGAAGATATTTGAAGCTATAGAAGATGCCGGCTTCGGAGCAGAGCTTATTAGCTCGGGAAATGATGAGAACAAAGTGTATCTAAAAGTTGAAGGAGTTGACTCTCCAGAAGATGTCAATTTTGTGATATCATCTCTTGAGTTAGTTGAAGGTGTGAATCATGTTGAAATGGACTTGACAGAGCATAAAGTTACTGTTAGCTATGATCCGGATGTTACAGGTCCAAGATCTTTTATAGACTGCATTCAAGCAGCTGCTCTTAAGCCCAAAATTTATCGGGCAACCTTGTACACTCCTTCAAGACAAAGAGACATGGGGAAGCTGCGTGAAATCAGGATGTACAGGAACCGGTTTTTGTTCAGCTGCTTATTTTCTGTTCCTGTGTTCATATTCGCCATGGTGCTTCCCATGTTACCTCCTTATGGTAACTGGTTAAACTATAAGATCCACAACATGCTTACCATGGGATTGTTTTTGAGATGGATCCTTAGCACACCAGTGCAGTTTGTAGTTGGCCAAAGGTTCTATGTGGGATCCTACCACGCACTGAGGCGAAGATCTGCTAACATGGATGTGCTTGTTGCTCTAGGCACTAATGCTGCGTATTTTTActctatttatgttttaataaaagcATTGACTTCTGCTACATTTCAAGGTCAAGATTTCTTTGAGACCAGCTCCATGTTGATATCCTTTATCCTCTTAGGGAAATATTTGGAGGTTGTGGCTAAAGGAAAAACATCTGATGCTTTAGCAAAGCTGACACAACTTGTTCCTGATAAATCTTATTTGTTAGCACTAGATACCGATGGAAATATTATATCAGAGACAGAAATTGATACGCAACTTATACAAAGGAATGACATTATTAAGATTGTTCCTGGGGCCAAAATTCCTGTTGATGGTATTGTTATAAAAGGGCAAAGCTATGTGAATGAAAGTATGATTACAGGGGAGGCAAGACCCATTAATAAAAGTCCAGGAGATAAGGTTATTGGTGGTACCGTCAACGATAGTGGCTGCTTACTGGTTAAGGCCACACATGTTGGATCAGATACTACACTTTCGCAAATTGTTCAGCTCGTGGAAGCTGCTCAGCTTGCCAGAGCACCGGTTCAGAAACTTGCTGACCatatttctctgttttttgTTCCTATTGTGGTTGCTGTAGCAATCATAACCTGGCTGGGATGGCTTATACCTGGTGTAGTTGGTATTTACCCCAAACATTGGGTACCAAAAGCTATGGATGAATTTGAGCTTGCTTTGCAGTTTGCTATTTCAGTGCTAGTTGTTGCCTGTCCTTGTGCTTTGGGTCTAGCAACCCCAACAGCTGTTATGGTTGCTTCAGGTATAGGTGCTTCTCAAGGTGTGCTCATCAAGGGTGGGGATGCACTGGAAAAGGCACACAAGGTAAAAACTGTTGTCTTTGATAAGACAGGGACACTAACAGTTGGAAAGCCAGTGGTAGTTAGTGCTGTGCTGTTTTCTAAATTATCAATGGAGGAGTTATGTGGCATGACTATTGCTGTAGAGGCAAGCAGCGAACACCCAATAGCAAAAGCTGTTGTGGCGCATGCAAAGAGATTGCGCCAGAAGTTGGGGACCTGCATCGAGCTAGTCCCGGATGTGATGGATTTTGAGGTGCACCCGGGAGCTGGGGTAAGTGGAAAAGTTGGTGAGAGGACTGTTTTAGTTGGGAACAAAAGACTCATGCATGCTTCTAATGTCCCAATATGCCCCGAGGTTGAGAGATACATTTCTGAAAATGAATTTCTGGCTAGAACATGTGTATTAGTTTCAATTGATGGAAAGGTTGCGGGAGCTTTCTGCGTAACAGATCCTGTAAAGCCCGAGGCTAGGCGTGTTATATCTTTTCTCCACTCTATGGGCATCTCAAGCATCATAGTGACTGGCGATAACCTCGCGACTGCAGCTGCTATTGCAAATGAAGTTGGTATTGACGAGGTTTTTGCCGAGACAGATCCGGTGGGAAAAGCTGATAAGGTGAAAGACATAAAGATGAAAGGAATGACGGTAGCAATGGTGGGTGATGGAATAAATGACTCACCGGCCTTAGTTGCAGCTGATGTTGGTATGGCAATTGGTGCTGGAACTGACGTGGCTATAGAAGCAGCTGATATAGTTCTTGTCAGAAGTAGCTTAGAGGATGTAATTACAGCCATAGATCTATCTAGAAAGACCATGTCTCGTATCCGGCTCAACTATATGTGGGCTCTTGGTTACAACATTCTCAGCATGCCAATTGCTGCAGGCGTATTATACCCCTTTACTGGAATCAGGTTGCCACCTTGGCTTGCTGGTGCTTGCATGGCTGCTTCATCTCTTAGTGTCGTTTCTTCATCTCTCTTGTTGCAGTTCTATAAGAAACCTTTGCATGTGGGATCTACACAATA 2864 0.4239 MEANGKDDLKIPLLQGPQDAEMRTLKFKIKDVKCASCVNSIESLVRNLSGVNSITVSPLDGQAAIIYVPKLVSANKVKETLQAAGFRVDGLQEKDISVCRFRIKGMACTSCSESVERALQMVDGVKKAVVGLALEEAKVHFDPNLTDTKKIFEAIEDAGFGAELISSGNDENKVYLKVEGVDSPEDVNFVISSLELVEGVNHVEMDLTEHKVTVSYDPDVTGPRSFIDCIQAAALKPKIYRATLYTPSRQRDMGKLREIRMYRNRFLFSCLFSVPVFIFAMVLPMLPPYGNWLNYKIHNMLTMGLFLRWILSTPVQFVVGQRFYVGSYHALRRRSANMDVLVALGTNAAYFYSIYVLIKALTSATFQGQDFFETSSMLISFILLGKYLEVVAKGKTSDALAKLTQLVPDKSYLLALDTDGNIISETEIDTQLIQRNDIIKIVPGAKIPVDGIVIKGQSYVNESMITGEARPINKSPGDKVIGGTVNDSGCLLVKATHVGSDTTLSQIVQLVEAAQLARAPVQKLADHISLFFVPIVVAVAIITWLGWLIPGVVGIYPKHWVPKAMDEFELALQFAISVLVVACPCALGLATPTAVMVASGIGASQGVLIKGGDALEKAHKVKTVVFDKTGTLTVGKPVVVSAVLFSKLSMEELCGMTIAVEASSEHPIAKAVVAHAKRLRQKLGTCIELVPDVMDFEVHPGAGVSGKVGERTVLVGNKRLMHASNVPICPEVERYISENEFLARTCVLVSIDGKVAGAFCVTDPVKPEARRVISFLHSMGISSIIVTGDNLATAAAIANEVGIDEVFAETDPVGKADKVKDIKMKGMTVAMVGDGINDSPALVAADVGMAIGAGTDVAIEAADIVLVRSSLEDVITAIDLSRKTMSRIRLNYMWALGYNILSMPIAAGVLYPFTGIRLPPWLAGACMAASSLSVVSSSLLLQFYKKPLHVGSTQ 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02561 954 Gene3D - 636 765 IPR023299 GO:0000166
Bva07g02561 954 SUPERFAMILY HMA, heavy metal-associated domain 168 239 IPR036163 GO:0046872
Bva07g02561 954 ProSiteProfiles Heavy-metal-associated domain profile. 173 239 IPR006121 GO:0046872
Bva07g02561 954 Pfam Heavy-metal-associated domain 27 86 IPR006121 GO:0046872
Bva07g02561 954 Pfam Heavy-metal-associated domain 100 160 IPR006121 GO:0046872
Bva07g02561 954 ProSiteProfiles Heavy-metal-associated domain profile. 98 164 IPR006121 GO:0046872
Bva07g02561 954 CDD HMA 176 221 IPR006121 GO:0046872
Bva07g02561 954 ProSitePatterns Heavy-metal-associated domain. 103 132 IPR017969 GO:0046872
Bva07g02561 954 SUPERFAMILY Calcium ATPase, transmembrane domain M 370 900 IPR023298 -
Bva07g02561 954 Gene3D - 393 515 - -
Bva07g02561 954 Gene3D - 170 241 - -
Bva07g02561 954 ProSiteProfiles Heavy-metal-associated domain profile. 24 90 IPR006121 GO:0046872
Bva07g02561 954 PRINTS P-type cation-transporting ATPase superfamily signature 779 789 - -
Bva07g02561 954 PRINTS P-type cation-transporting ATPase superfamily signature 757 768 - -
Bva07g02561 954 PRINTS P-type cation-transporting ATPase superfamily signature 625 639 - -
Bva07g02561 954 PRINTS P-type cation-transporting ATPase superfamily signature 832 851 - -
Bva07g02561 954 PRINTS P-type cation-transporting ATPase superfamily signature 855 867 - -
Bva07g02561 954 PRINTS P-type cation-transporting ATPase superfamily signature 461 475 - -
Bva07g02561 954 PRINTS H+-transporting ATPase (proton pump) signature 832 848 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva07g02561 954 PRINTS H+-transporting ATPase (proton pump) signature 863 888 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva07g02561 954 TIGRFAM TIGR00003: copper ion binding protein 101 161 IPR006122 GO:0005507
Bva07g02561 954 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 338 941 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bva07g02561 954 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 5 950 - -
Bva07g02561 954 SFLD p-type atpase 607 884 IPR044492 -
Bva07g02561 954 SUPERFAMILY Calcium ATPase, transduction domain A 425 511 IPR008250 -
Bva07g02561 954 CDD P-type_ATPase_Cu-like 264 928 - -
Bva07g02561 954 CDD HMA 101 163 IPR006121 GO:0046872
Bva07g02561 954 Pfam E1-E2 ATPase 424 603 - -
Bva07g02561 954 SUPERFAMILY HMA, heavy metal-associated domain 19 90 IPR036163 GO:0046872
Bva07g02561 954 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 378 909 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva07g02561 954 SFLD Haloacid Dehalogenase 607 884 - -
Bva07g02561 954 Gene3D - 616 882 IPR023214 -
Bva07g02561 954 SUPERFAMILY HAD-like 623 938 IPR036412 -
Bva07g02561 954 PANTHER ATP7, ISOFORM B 5 950 - -
Bva07g02561 954 Gene3D - 97 168 - -
Bva07g02561 954 Pfam haloacid dehalogenase-like hydrolase 621 846 - -
Bva07g02561 954 Gene3D - 18 96 - -
Bva07g02561 954 SUPERFAMILY HMA, heavy metal-associated domain 95 168 IPR036163 GO:0046872
Bva07g02561 954 ProSitePatterns E1-E2 ATPases phosphorylation site. 627 633 IPR018303 -
Bva07g02561 954 CDD HMA 26 88 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02561 Bva-Chr7 20318274 20324073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02561 27 947 Primary Pumps ATPases AT1G63440 55.987 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02561 K17686 - gmx:100793894 1564.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02561 07 20318274 20324073 Bva07g02561 07 20318274 20324073 ECH