Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02560 atgaataattcaAGTTTGGGAGGTGGGTTTTTGTCGGGTCCCACTGGGGGTATGTTGGACCTCGAATCGCCATTTCATCGACACCAATCGACCCAGTTGGGTCATCCTTCAGTAACGAGTCAGCACCACATGAATATGATAGGTGGTCTGGAAAGTGATCACCACCCAATTGGGCTAATGGAAGTGAAAGGCTCTAATGCGACATTCAATTTTGGTAAGGGAAAGGCAATCGCTCCTTCTAATCCCACCAACAGTAATGATCCGAGTGAGGAGGATGAGCCAAGTTATGCAGAAGATGGAAACTGTGAGAACTTTGATGGTGGTAAGGGCAAAAAGGGGTCTCCTTGGCAGCGAATGAAGTGGACGGATAATGTGGTAAGGCTTCTTATCGGAGTGGTGGCTTGCGTCGGAGACGATGGTACAATTGATGGCATGGATGGCCTTAAAAGGAAATCTGGAATTTTGCATAAGAAGGGTAAGTGGAAAACGGTCTCCAAGATAATGATAAGCAAGGGCTGCCATGTTTCACCGCAGCAGTGTGAGGATaagtttaatgatttaaataagAGGTACAAAAGGTTAAACGATATACTTGGAAGGGGAACTAGTTGTAGAGTGTTTGAGAATCCCACATTGTTGGATTCTATGCCCAACCTATCAGCTAAGGCGAAGGACGACGTCAGAAAGATTTTGAGTTCTAAACACTTGTTTTATAAGGAGATGTGTGCCTACCATAATGGGCAACGGATACCTAATTGTCATGATCTTGATTTACAAGGTTATTCCATGCAACACGGGAGGGACAGTAACGGCTCAGATGAGGAAGCTGAGGAAAACATTAATGAAAGTGAAGATGATGAGTTGGGTACTGATGGTAATAATAACACtcatggggatggggaggggaTGGAGGAGTTCTGTGacagaaagaaattaagtgaGGAGGATGGTCATTTCTGGCCGCAGTCTTTTGGGCTGGATAAATTTGAAGCTGAAATGGCTAGGATTTTTCAAGACCCTACTAAGTCATTATGGGAACGAAGAGAGTGGCTTAAGATGCAGACGAGGCAGCTGCAAGAGCAAAGCGTCAGCTACCAAGCTCAAGCTCTCGAGCTTGAGAAGCAACGTTTTAAATGGCTAAGATACTGCAGCAAGAAGAATAGGGAGCTGGAGAGGTTGAGGTTGGAGAACGAGAGGATGAAGTTGGAAAATGAGCGCAAGGTCTTGCAACTGAAGCAGAAGGAGCTCGAGACAGATTTTAGGAGGTCCGATATGTCCATGGAGAGGCTGCAAGCGAGGGATATCAACTCGGGGAGACAGCATTA 1325 0.4362 MNNSSLGGGFLSGPTGGMLDLESPFHRHQSTQLGHPSVTSQHHMNMIGGLESDHHPIGLMEVKGSNATFNFGKGKAIAPSNPTNSNDPSEEDEPSYAEDGNCENFDGGKGKKGSPWQRMKWTDNVVRLLIGVVACVGDDGTIDGMDGLKRKSGILHKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTSCRVFENPTLLDSMPNLSAKAKDDVRKILSSKHLFYKEMCAYHNGQRIPNCHDLDLQGYSMQHGRDSNGSDEEAEENINESEDDELGTDGNNNTHGDGEGMEEFCDRKKLSEEDGHFWPQSFGLDKFEAEMARIFQDPTKSLWERREWLKMQTRQLQEQSVSYQAQALELEKQRFKWLRYCSKKNRELERLRLENERMKLENERKVLQLKQKELETDFRRSDMSMERLQARDINSGRQH 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02560 441 MobiDBLite consensus disorder prediction 420 441 - -
Bva07g02560 441 MobiDBLite consensus disorder prediction 71 116 - -
Bva07g02560 441 Coils Coil 383 419 - -
Bva07g02560 441 MobiDBLite consensus disorder prediction 261 303 - -
Bva07g02560 441 Pfam Myb/SANT-like DNA-binding domain 118 209 IPR044822 -
Bva07g02560 441 Coils Coil 355 375 - -
Bva07g02560 441 Gene3D - 121 193 - -
Bva07g02560 441 PANTHER TRANSCRIPTION FACTOR TRIHELIX FAMILY-RELATED 12 423 - -
Bva07g02560 441 MobiDBLite consensus disorder prediction 275 289 - -
Bva07g02560 441 PANTHER F16F4.11 PROTEIN-RELATED 12 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02560 Bva-Chr7 20315329 20317442 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva07g02560 Myb_DNA-bind_4 1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02560 - - ccaj:109806698 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02560 07 20315329 20317442 Bva07g02560 07 20315329 20317442 ECH