Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02559 ATGAATTGGAACTCACATATGGAGGTTCATTACAATAACATCAGCTATCCTTATAATACAGCAGGAAGCTTTATCGAATATTTTGAAGGTCTCACCTATGAACatgtcaatttcattttttctggTGCTTCACATGCTCAGGATAGTTTTTACCCGTCAACAAGTGTTTACAAGTTTGGACTATCTGAACCTGATAGTACTCCGTACTATCACTATAGCCATCCTTATGAGTTGAATcatcaagaatcaaatatGGATGACCACAGAAGGCCTTCAGAGAACTCCTCAACAATCAATGAACAGATGGCAGCAGTAAGTACGGAATGGGAAGGAGTTAACGTTACAACACAAGACAATCCTATTGAATGTCCACAAAGACATCACAATTCCCATGATTATCAGGTCATTTGGCAAGACAATATTGATCCCGACAACATGACTTATGAGgAACTTCTTGAGTTAGGTGAAGCTGTTGGAACTCAAAGTCGTGGTCTCTCCCAAGAACAAATCTCTTTGCTTCCAACCTCGAAGTACAAGGGAGGGTTCTTCGTAAGGAAAAAATCACGTGACGAGAGATGCGTGATTTGCCAGATGGAGTATAAAAGAGGGGACAAGCGGATAATGTTACCTTGCAAACACGCCTATCATGCTAGTTGCGGGACCAAATGGCTTAGCATCAATAAGGCTTGCCCTATATGTTACAGGGAGGTGTTTGCGGACACATCAAAACACAAATA 737 0.3935 MNWNSHMEVHYNNISYPYNTAGSFIEYFEGLTYEHVNFIFSGASHAQDSFYPSTSVYKFGLSEPDSTPYYHYSHPYELNHQESNMDDHRRPSENSSTINEQMAAVSTEWEGVNVTTQDNPIECPQRHHNSHDYQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLSQEQISLLPTSKYKGGFFVRKKSRDERCVICQMEYKRGDKRIMLPCKHAYHASCGTKWLSINKACPICYREVFADTSKHK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02559 245 Pfam Ring finger domain 192 233 IPR001841 -
Bva07g02559 245 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 243 - -
Bva07g02559 245 ProSiteProfiles Zinc finger RING-type profile. 193 233 IPR001841 -
Bva07g02559 245 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 243 IPR033276 GO:0004842|GO:0016567|GO:0046621
Bva07g02559 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 239 IPR013083 -
Bva07g02559 245 SUPERFAMILY RING/U-box 192 240 - -
Bva07g02559 245 SMART ring_2 193 233 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02559 Bva-Chr7 20310381 20314402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02559 8 244 C3H Transcription Factor Family AT3G63530 42.975 5.04e-64 198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00079 09 376776 380631 Bva07g02559 07 20310381 20314402 BWGD
Bva07g02559 07 20310381 20314402 Bva07g02559 07 20310381 20314402 ECH
Bva09g00079 09 376776 380631 Bva07g02559 07 20310381 20314402 ECH