Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02556 ATGAGAAAGCCAGAGCCCTCCGTGAAAAACAATAGCAAGCTTAGGAAGGGGTTATGGTCACCCGAAGAAGATGACAAGCTCATGAACTATATGCTAAACAATGGACAAGGTTGTTGGAGTGACGTGGCCAGAAATGCTGGCTTGCAAAGGTGTGGCAAAAGTTGTCGCCTTCGATGGATCAATTACTTGAGGCCTGATCTCAAACGAGGCGCATTCTCACCCCAAGAAGAAGAACTCATCATCCATTTGCATTCCCTTCTTGGCAACAGATGGTCTCAAATAGCGGCGCGCTTGCCCGGCCGAACTGACAATGAAATCAAGAATTTCTGGAAttcaacaataaagaaaaggcTCAAGAATCTGTCATCCACAAACACAAGCTCACCGAACGCAAGCGAGTCTTCAATATCTGAGCCTAAAGACCTCAACATGGGAAGGTTTATTTCTACGCACGATCACCAAAAGGGCTTTATGCCTGTGCTCAATTCATCTTCACTATCAATGCAAGCCACAGTTCTCACAAACATAATTGACAGATTGCCTTTGCTCGAGCATGGACTAAACATGCCAGCTGCAGGTGGGTTCTTCAATGTTACAGGGCCATGCTTCACAGAAAGTGGAGTTGATAACAATggtttttatttagaaaatggaGTTTTGGGAAGTGTAAATATTGGACCTGAAGGGGACCTGCTCGTTCCGAGTGCCACTGATAACCCAAAAGTGGAGATTGCGAGCAATAGGGACACTAACAATAGTTACTTTGACATCATTAATAAGAATCACAGAGCAGAAAATAATAGAGGTGGGGTGGAGAATCTATTTCAAGATCAGGAGTTAACAGTGGGAGAATGGGACTTGGAGGACTTGATGAAAGatgtttcttcctttccatttcttgatttttcaagCTG 914 0.4136 MRKPEPSVKNNSKLRKGLWSPEEDDKLMNYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTNTSSPNASESSISEPKDLNMGRFISTHDHQKGFMPVLNSSSLSMQATVLTNIIDRLPLLEHGLNMPAAGGFFNVTGPCFTESGVDNNGFYLENGVLGSVNIGPEGDLLVPSATDNPKVEIASNRDTNNSYFDIINKNHRAENNRGGVENLFQDQELTVGEWDLEDLMKDVSSFPFLDFSS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02556 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Bva07g02556 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Bva07g02556 304 PANTHER MYB DOMAIN PROTEIN 55 7 304 - -
Bva07g02556 304 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Bva07g02556 304 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Bva07g02556 304 CDD SANT 71 111 IPR001005 -
Bva07g02556 304 PANTHER MYB TRANSCRIPTION FACTOR 7 304 - -
Bva07g02556 304 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Bva07g02556 304 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Bva07g02556 304 Gene3D - 13 69 - -
Bva07g02556 304 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Bva07g02556 304 CDD SANT 19 63 IPR001005 -
Bva07g02556 304 SMART sant 68 116 IPR001005 -
Bva07g02556 304 SMART sant 15 65 IPR001005 -
Bva07g02556 304 Gene3D - 70 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02556 Bva-Chr7 20295668 20297663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02556 10 302 MYB Transcription Factor Family AT3G08500 46.057 8.42e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva07g02556 Myb_DNA-binding 3.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02556 K09422 - gmx:100786151 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00087 09 426013 428117 Bva07g02556 07 20295668 20297663 BWGD
Bva07g02556 07 20295668 20297663 Bva07g02556 07 20295668 20297663 ECH
Bva09g00087 09 426013 428117 Bva07g02556 07 20295668 20297663 ECH