Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02545 ATGGACCCTGCCGTTCTGGATGACATTATCAAGCGGCTATTGGAGTTTCGACTGGGCAAACAGAAACAGGTGCAGCTCATGGAGTCCGAGATCCGTCACCTTTGCACTGCCGCCAGAGAAATCTTCCTCCAACAGCCCAGTCTTCTCGAAATCCAGGCACCCATCAAGATCTGCGGTGACATTCACGCACAGTACTCTGACCTCTTGAGGTTATTCGAATACGGCGGATTTCCTCCCaatgcaaaatatttattcctGGGTGACTACGTCGACCGCGGGAAGCAGAGCTTGGAAACAATATGTCTTTTGCTTGCCTACAAGATCAAATTCCCAAACAAGTTCTTTCTTCTGAGAGGAAATCACGAATGTGCTACAGTTAACCGCATATATGGATTTTACGACGAATGTAAACGCCGTTTCAACGTCAGACTCTGGAAGACCTTCACCGACTGTTTTAACTGTCTTCCTGTCGCTGCGCTCATTGATCATAAGATTTTATGCGTGCACGGAGGCCTTTCCCCTGAATTAACAAATGTGGATCAAATTAGGAACTTACCTCGTCCGACTGATGTTCCGGATTCTGGTCTGCTTTGTGATTTACTTTGGTCGGATCCCGGTAAAGATGTTACTGGCTGGGGAAACAATGATCGAGGAGTCTCCTACACCTTTGGTGCCGACAAGGTCTCAGAGTTCTTAACCAACAACGATATGGATCTTATTTGCCGTGCTCATCAGGTCGTTGAAGACGGATATGAATTCTTTGCCGACCGACAGCTTGTCACTATATTCTCTGCTCCCAATTATTgtggggagtttgataatgcCGGTGCTCTCTTGACTGTTGATGAACATTTAACGTGCTCTTTCCAAATTCTTGATCCAGCAGATAAAACTGTAGCCGGAGGTAGCGGCAATGGTCGaccaaattttacaattaaaaatagtggAGTTACTTCTGaaaatta 965 0.4352 MDPAVLDDIIKRLLEFRLGKQKQVQLMESEIRHLCTAAREIFLQQPSLLEIQAPIKICGDIHAQYSDLLRLFEYGGFPPNAKYLFLGDYVDRGKQSLETICLLLAYKIKFPNKFFLLRGNHECATVNRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDHKILCVHGGLSPELTNVDQIRNLPRPTDVPDSGLLCDLLWSDPGKDVTGWGNNDRGVSYTFGADKVSEFLTNNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGALLTVDEHLTCSFQILDPADKTVAGGSGNGRPNFTIKNSGVTSEN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02545 321 SUPERFAMILY Metallo-dependent phosphatases 21 297 IPR029052 -
Bva07g02545 321 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Bva07g02545 321 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Bva07g02545 321 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Bva07g02545 321 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Bva07g02545 321 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Bva07g02545 321 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Bva07g02545 321 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Bva07g02545 321 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Bva07g02545 321 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Bva07g02545 321 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Bva07g02545 321 Gene3D - 2 301 IPR029052 -
Bva07g02545 321 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 304 - -
Bva07g02545 321 MobiDBLite consensus disorder prediction 304 321 - -
Bva07g02545 321 SMART pp2a_7 26 296 IPR006186 GO:0016787
Bva07g02545 321 CDD MPP_PP1_PPKL 5 294 - -
Bva07g02545 321 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 304 - -
Bva07g02545 321 MobiDBLite consensus disorder prediction 300 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02545 Bva-Chr7 20253806 20255013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02545 55 239 Calmodulin-binding Proteins AT5G63870 31.818 2.07e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02545 K06269 - jre:109017858 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02545 07 20253806 20255013 Bva07g02545 07 20253806 20255013 ECH