Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02543 ATGTTTGGCAACAGTTTCTGCAAGAGGGGGTTCTCTAATGCACAAGCACTGGGTGGCCACCTGAACATCCACAGGAAAGAAAAAGCCAAGCTCAAGAAATCTGCAAACCAAGACAGAAGGCCTTGGATTGCTGATATCAGACAAGTTGCTCTTTTTGCTGAAACACCTCACAGTCAAGAGCCACCTGCATGTCAACCAATTCATTGGGAATCTACACAAAAGGATTTAGATTTAGACCTTGAACTCAGACTCGGGCCTCACCCACAAGACTCGTCACCGCCAACTAATTCAGTGGTACCACCagaaaattcttttgaatCCAATAAACACACAACACACATGTG 344 0.439 MFGNSFCKRGFSNAQALGGHLNIHRKEKAKLKKSANQDRRPWIADIRQVALFAETPHSQEPPACQPIHWESTQKDLDLDLELRLGPHPQDSSPPTNSVVPPENSFESNKHTTHM 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02543 114 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 38 - -
Bva07g02543 114 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 69 93 - -
Bva07g02543 114 PANTHER OS07G0101800 PROTEIN 5 38 - -
Bva07g02543 114 PANTHER OS07G0101800 PROTEIN 69 93 - -
Bva07g02543 114 Gene3D Classic Zinc Finger 5 61 - -
Bva07g02543 114 MobiDBLite consensus disorder prediction 89 107 - -
Bva07g02543 114 MobiDBLite consensus disorder prediction 81 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02543 Bva-Chr7 20246368 20248299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02543 5 44 C2H2 Transcription Factor Family AT3G09290 57.500 2.10e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02543 - - gmx:100527724 83.9593