Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02535 atgggAGAGGAGGTGAAGATGACGGAGTATGAAGCCGCCACTGCTGACGATGACGATGAGCGCGTGGTGGACTGGGAGATGGGTCTCCCCACCGCCGATGATCTCACTCCTTTATCTCAGCTGTTGATCCCGCCGGAGCTGGCCTCCGCCTTTAGCATCTCTCCTGTGCCGTATCGAACGCAGCTCGATGTCAATCGTGCCTCGCAGAATACTCTGTCGAGTCTTCGCGGCGGAACTCCTCAGGCCTTTTCCTCGAACAATTTCAATTCCTTCAACCATGACCGGAGTCGGGACCCGATGGTGGTCGAAGGAGATGAAGAAACTGATCGAGACGGTTCAGGGCCTGATTCTAGGAAACTCAGGAAGATTGATTGTGCAGAAGAAGCTGATTCGGCTCTGCGAACTGACAATTCCACCGATGATCCATCTGCTCGCACCCTGAAGCGTCCTCGACTTGTATGGACACCACAGTTACACAAACGCTTTGTTGATGTAGTCGCTCATCTGGGAATCAAGAACGCTGTCCCCAAAACAATTATGCAATTAATGAACGTTGAGGGATTGACTCGAGAAAATGTGGCCAGTCATCTGCAAAAGTATCGACTTTACTTAAAGAGGATGCAGGGGCTCTCTAATGAGGGTCCGTCGTCGTCGGACCATCTCTTCGCATCCACCCCTGTGCCCCAGAGCTTACACGAGTCTGGTGGAAGTGCTCATTCCCATGGAAATGGCCATCTCCCCGTTCACATTCCCATGCCATATCCACCGCCTATGCTGCCAATGCCCGTTATTGGCATGCCACACGGTCATAGCCACATGGGAATGCCGGTGGCTAATCCAGGTCCCACTGCAGCCTTCCATGGCTTCGACTCTCATCCCTACAACATGTTGCAGCAAAGGGATTGGTCTGCCAATAAGTATGCTTCGGTTCTATCATACCCTCATCTTGCTCCTAATGATAAATG 965 0.5181 MGEEVKMTEYEAATADDDDERVVDWEMGLPTADDLTPLSQLLIPPELASAFSISPVPYRTQLDVNRASQNTLSSLRGGTPQAFSSNNFNSFNHDRSRDPMVVEGDEETDRDGSGPDSRKLRKIDCAEEADSALRTDNSTDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDHLFASTPVPQSLHESGGSAHSHGNGHLPVHIPMPYPPPMLPMPVIGMPHGHSHMGMPVANPGPTAAFHGFDSHPYNMLQQRDWSANKYASVLSYPHLAPNDK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02535 321 MobiDBLite consensus disorder prediction 211 237 - -
Bva07g02535 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 154 205 IPR017930 -
Bva07g02535 321 MobiDBLite consensus disorder prediction 71 94 - -
Bva07g02535 321 MobiDBLite consensus disorder prediction 211 248 - -
Bva07g02535 321 MobiDBLite consensus disorder prediction 96 122 - -
Bva07g02535 321 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 320 IPR044841 GO:0003700|GO:0006355
Bva07g02535 321 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 320 - -
Bva07g02535 321 MobiDBLite consensus disorder prediction 71 122 - -
Bva07g02535 321 Gene3D - 146 208 - -
Bva07g02535 321 Pfam Myb-like DNA-binding domain 153 201 IPR001005 -
Bva07g02535 321 SUPERFAMILY Homeodomain-like 146 206 IPR009057 -
Bva07g02535 321 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 150 202 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02535 Bva-Chr7 20209341 20212582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02535 1 275 G2-like Transcription Factor Family AT3G46640 57.388 1.10e-87 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva07g02535 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02535 - - zju:107411020 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02535 07 20209341 20212582 Bva07g02535 07 20209341 20212582 ECH