Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02525 ATGGCCTCTATGGACGCCCTTGTTGAAAATTTCCCCTCTTCCATGAACGGATTTAGATTTAAGAATGGTCCTATTTCGGTATTTTCAAATCAGAACCCTGGCAAAGGGTTTAAATTTGGTGGTAACTCTGTTGATTTATCTTCTCCTCCAACCAAACAGGAGTCTCGCTGCGATTCTGGTCAATCTTCTTCTGACACCAACTCAAATGGAGAACCTACGGAAAATGCCAAGTTCTCCAATCCTATTCTCAGATACATAAGTGACATCCTTATGGATGAAGAAGACGACTTGGAGCGAAAGCCCTGCATGTTGCAGGATTGTTTAGCACTACAGGCTGCTGAGAAGTCGTTCTATGATGTCCTTGGTAGTGATTATCCTTCATCAACCCGTGAAATCACTGCTTCTTTTCTTCGTGAAAGCATCGATAGCCAGGACCCAGATGATAATTTTCGTCGCACCACTAGTGCTGAGAGCAATTGCAGCTATGCTAGTACTGATAATTCGTCTGAGTCCGATTGGCTTAATGGGGGTGATATTGAATCTTCTTTCCTACAAACTCCTATAGTTACTTCAGCAGAATATGCCTACCGGGTTTCAGATGCATCTCCTGATCCATTTAGAGATAGACAAGCTTCTTTGCTTCACAACGGAACCTGGGATATCATTCAATCTGCAAACAACCCTATGATGATGGACAATTCAGCACCTAAAAAAtcgaaggaaaagagaagcCATCGGGTGGATGATACTgtagatgaagatgaaggGAGAGGCGGCAAAATTTCGGCTCTCTATTCTGATGATTTGGAATCATCAGAGATATTTGATGAGGTACTGTTATGTCATGGTGTCGAAAGAAGTCAATCTATGTCATGTGCTGTTCCTTCTGCTGTTGGTGAATCATCACAAAATGGGAATTTTCAACTGAGTTTGGACCTAGCAGGATCTAATTCTAATGGAAAGGCAACGCGTTCAAAGAAAGGAACTAACAAGGGAACAACCGTAGATTTATGGACTCTTCTAACTCAATGTGCACAGGCAGTGTCAAACTATGACCAGAGGAGTGGAAATGAGCTACTCAAGCAGATTAGGCAGCACTCTTCCCCTTTTGGCGATGGAATCCAGAGATTAGCTCATTACTTTGCTGTTGGGCTTGAGACGCGATTGGCTGCTGGAACACCGTCATATTTGCACTTTGATAGTAATGGGGCAACCGCTGCTGATATGTTAAAAGCCTACCGACTATACATTACAGCATCTCCTTTCCAGAGGATGTCAAATTTCCTGGCTAATCGAACAATTCTGAAGCTGGTGGAGAAAGAAACAAGGCTTCACATTATAGATTTTGGCATTTGTTATGGTTTCCAATGGCCCTGCCTTATCCAACGTCTTTCTGAGAGACCAGGTGGGCCTCCCATGCTTCGTATAACAGGAATTGATCTTCCTCAATCAGGGTTTCGGCCTGCAGAAAGGCTCGAGGAGACAGGTAGGCGCTTGGAAAATTACTGCAAGAGATTCAATGTCCCCTTTGAATACAATTGCATAGCACAGAAATGGGAAACCGTCCAACTAGAGGATCTCAAAATCGAGCGGGATGAAATAACCGTTGTTAACTGTCTGTACCGATTGAAGAATCTACCTGATGAGACAGTGTCAGTGAACTGTCCAAGAGGTGCTGTGTTGAAGCTGATCAGGAAGATTAATCCTAATATGTTCATACATGGGGTTGTGAATGGCACGTATAATGCGCCATTTTTCCTTACTCGGTTCAGGGAAGCGCTCTTTCACTTCTCAGCCTTGTTTGATATGTTTGAGGCTAATGTCCCTCGTGAAGATGCACAAAGGCTTATATTTGAGAAAGGGATATTTGGTAGGGATGCCATAAATGTTATAGCATGTGAGGGGGCAGAGAGGGTTGAAAGGCCAGAGACCTACAAACAGTGGCAGGTTAGAAACCGGAGAGCTGGTTTCAAGCAACTCCGACCGGACCCAGAACTGTTGAATAGAACCAAAGAAATGGTGAAGATGGAATATCACAAGGATTTTGTAGTGGATGAGGATGGCAAGTGGGTGTTGCAGGGATGGAAAGGGCGTATCATTCATGCTCTTTCTTATTGGAAACCTGCATA 2129 0.4298 MASMDALVENFPSSMNGFRFKNGPISVFSNQNPGKGFKFGGNSVDLSSPPTKQESRCDSGQSSSDTNSNGEPTENAKFSNPILRYISDILMDEEDDLERKPCMLQDCLALQAAEKSFYDVLGSDYPSSTREITASFLRESIDSQDPDDNFRRTTSAESNCSYASTDNSSESDWLNGGDIESSFLQTPIVTSAEYAYRVSDASPDPFRDRQASLLHNGTWDIIQSANNPMMMDNSAPKKSKEKRSHRVDDTVDEDEGRGGKISALYSDDLESSEIFDEVLLCHGVERSQSMSCAVPSAVGESSQNGNFQLSLDLAGSNSNGKATRSKKGTNKGTTVDLWTLLTQCAQAVSNYDQRSGNELLKQIRQHSSPFGDGIQRLAHYFAVGLETRLAAGTPSYLHFDSNGATAADMLKAYRLYITASPFQRMSNFLANRTILKLVEKETRLHIIDFGICYGFQWPCLIQRLSERPGGPPMLRITGIDLPQSGFRPAERLEETGRRLENYCKRFNVPFEYNCIAQKWETVQLEDLKIERDEITVVNCLYRLKNLPDETVSVNCPRGAVLKLIRKINPNMFIHGVVNGTYNAPFFLTRFREALFHFSALFDMFEANVPREDAQRLIFEKGIFGRDAINVIACEGAERVERPETYKQWQVRNRRAGFKQLRPDPELLNRTKEMVKMEYHKDFVVDEDGKWVLQGWKGRIIHALSYWKPA 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02525 709 MobiDBLite consensus disorder prediction 44 76 - -
Bva07g02525 709 MobiDBLite consensus disorder prediction 227 259 - -
Bva07g02525 709 ProSiteProfiles GRAS family profile. 328 707 IPR005202 -
Bva07g02525 709 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 40 707 IPR005202 -
Bva07g02525 709 Pfam GRAS domain family 339 707 IPR005202 -
Bva07g02525 709 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 40 707 - -
Bva07g02525 709 MobiDBLite consensus disorder prediction 153 171 - -
Bva07g02525 709 MobiDBLite consensus disorder prediction 235 259 - -
Bva07g02525 709 MobiDBLite consensus disorder prediction 143 171 - -
Bva07g02525 709 MobiDBLite consensus disorder prediction 38 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02525 Bva-Chr7 20159028 20161765 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02525 4 708 GRAS Transcription Factor Family AT2G29060 41.877 2.29e-179 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva07g02525 GRAS 4.4e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02525 - - gmx:100815586 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02525 07 20159028 20161765 Bva07g02525 07 20159028 20161765 ECH