Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02524 ATGGATAATCCAAATGTTCCTTCTGATCCTTACTATGCTGTGAATCCTACTTCCCAGTCGAGCATCAGCACGGCTGAAGATTCTCCCTTAGACGAGAGTGGCTTTTCAAGTACTGTCTTCCGGTACATAAGTCAAATGCTCGTGGAAGAGGACATCGAGGAGGAGCCATGCACGTTCCATGATTCCTTGTCCCTTCAAGCCGCTGAGAAATCGTTATATCAAGTCATTGGGGGGGAATACTCTTGTTCCACCTCTCAACTTGAGCTTCGCAATCATCGCAGCGTAGAGTGTCCAGATGACAGTCTCTCTGCCAACTCGAGTGATTACAGTAGTAGTGGCAGTTGTGGTAGTAGCACCAGCAGCAACTGCTTCAGTTCCCACATTGATTACACAGAGTACGTACCTTCTGTACTGCAACCCGATTCTCCTTCTAAGTTTGTTTTTCAGTCCAGTTCACAGTCTTCCGTCAACAGTAATGGGTCGGTAAGTTCTTCAACAAACGACTGTTTGGATTCTACATTGCTTACCAAGAGTGAGTCTGTGTTCAAATTCGAGAAAGGTATGGAGGAAGCTAGAAAGCTTCTTCTTAAACACAACCGATTTCCCTTCAGTATTGACCTGGAAGACAAGACCTTTCCTCCCTCATTCAGCAAGACTCCACATGCGGTAATTAAGAGCGAGAGCAACCACTTGCCTAACGAGTTGAAAGAAAGCAGGAAGAATCATGGGCGGGATCAGGACGAGACAGACTTAGAAGAGGGGAGAAAAAACAAGCTTTCAGCAGTTTACACCGATGAGGGAGAGCTATCAGATTTATTTGATAAGGTTCTGCTGCTGGGTATTGGGTTGGGAAAAGACGCACCTGAGAGCCGTATTAGAAGACAAGTCATGAGCTATAAAAAGCAATTTGTGGATCTGAGGACACTTGTGATTTTATGTGGACAAGCTGTTTCCTCTGATGATCGTGGGACTGCTAATGAGTTGCTAAGGCAAATCAGGCAGCACTCTTCCCCACTCGGTGATGGAACTCAAAGGTTGGCCCATTTCTTTGCAAATGCCCTTGAAGCACGCTTAGCGGGAGCTGGTACCCAGATTTTTAGTGCTCTATCCTCCAAAAGGACTAGTGGCGCAGACATGGTGAAAGCTTACCAAATGCATATTTCAGCGTGCCCATTCGAGAAGCTTGCAATCGTGTTCGCAAACCGTACAATCGCGAGTGCATCTAAACAAGCGGAAACGCTTCATATTATAGATTTTGGTATCCGTTATGGATTCAAGTGGCCTGCACTCATCCATCGTCTCTCGCGACGAGCTGGTGGATCCCCCAAGCTGCGAATTACAGGGATTGAGCTCCCACAACCTGGCTTCAGGGCAGGGGAGGGAGTCCAGGAGACGGGGCGTCGCTTGGCATTGTATTGTGAGCGCTTCAAAGTTCCATTCGAGTACAATGCTATTGTTGCACAGAAATGGGAAAACATCCAAATTAAGGATCtcaagttaaagaaaaatgaatttatagcGGTGAATTGTCTGGTTCGATTTGAGAATCTACTTGATGAGACAGTTGTGCCGAATAGTCCCAAGGATGCTGTTCTGAATTTAATCAGGAGAATAAATCCCGACATATTTGTTCATGCTATTCTGAATGGTTGCTACAATGCGCCCTTCTTTGAGACACGCTTCCGGGAGGCTTTCTACCACTACTCTTCCTTGTTTGATATGCTTGACACCAATGTTGCAGTTGAAGATCCAGCGAGGTTAATGTTTGAGAAGGAGTTCTGGGGGCGGGAAATAACGAATGTTATAGCTTGTGAGGGGTTGGAGAGGGTCGAGAGGCCCGAGACATATAAGCAATGGCAAGTTCGGAACATGAGAGCTGGTTTTAGACAGCTACCGTTGGATCACAGCCTCGTTAACGTATTAAGGGGAAAGTCAAGAGATGACTATCACTCTGATTTTATTCTTCACGAAGACGGCAACTGGATGCTACAAGGTTGGAAGGGTCGAGTTCTttatgcttcttcttcttggatACCAATATCagattg 2048 0.4512 MDNPNVPSDPYYAVNPTSQSSISTAEDSPLDESGFSSTVFRYISQMLVEEDIEEEPCTFHDSLSLQAAEKSLYQVIGGEYSCSTSQLELRNHRSVECPDDSLSANSSDYSSSGSCGSSTSSNCFSSHIDYTEYVPSVLQPDSPSKFVFQSSSQSSVNSNGSVSSSTNDCLDSTLLTKSESVFKFEKGMEEARKLLLKHNRFPFSIDLEDKTFPPSFSKTPHAVIKSESNHLPNELKESRKNHGRDQDETDLEEGRKNKLSAVYTDEGELSDLFDKVLLLGIGLGKDAPESRIRRQVMSYKKQFVDLRTLVILCGQAVSSDDRGTANELLRQIRQHSSPLGDGTQRLAHFFANALEARLAGAGTQIFSALSSKRTSGADMVKAYQMHISACPFEKLAIVFANRTIASASKQAETLHIIDFGIRYGFKWPALIHRLSRRAGGSPKLRITGIELPQPGFRAGEGVQETGRRLALYCERFKVPFEYNAIVAQKWENIQIKDLKLKKNEFIAVNCLVRFENLLDETVVPNSPKDAVLNLIRRINPDIFVHAILNGCYNAPFFETRFREAFYHYSSLFDMLDTNVAVEDPARLMFEKEFWGREITNVIACEGLERVERPETYKQWQVRNMRAGFRQLPLDHSLVNVLRGKSRDDYHSDFILHEDGNWMLQGWKGRVLYASSSWIPISD 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02524 682 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 679 IPR005202 -
Bva07g02524 682 MobiDBLite consensus disorder prediction 230 253 - -
Bva07g02524 682 PANTHER SCARECROW-LIKE PROTEIN 14 17 679 - -
Bva07g02524 682 MobiDBLite consensus disorder prediction 1 32 - -
Bva07g02524 682 MobiDBLite consensus disorder prediction 148 168 - -
Bva07g02524 682 Pfam GRAS domain family 307 677 IPR005202 -
Bva07g02524 682 MobiDBLite consensus disorder prediction 223 253 - -
Bva07g02524 682 ProSiteProfiles GRAS family profile. 297 678 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02524 Bva-Chr7 20155517 20158467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02524 39 681 GRAS Transcription Factor Family AT1G07530 53.188 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva07g02524 GRAS 1.8e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02524 - - ahf:112736647 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02524 07 20155517 20158467 Bva09g00124 09 565544 573034 BWGD
Bva07g02524 07 20155517 20158467 Bva07g02524 07 20155517 20158467 ECH
Bva09g00124 09 565544 573034 Bva07g02524 07 20155517 20158467 ECH