Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02507 ATGGAGCTTCTGAAGCCTTCACACCCTCCTCAGCATGTAGCCACCGGAGAAACCTTTTATGGGTTCTCACTGCCATCGAGCCTGCCTTTAGGCCTTCACGGGTTGGCGACTTCTCATGCGGTCGAAGCTATAGAAGAATGTGATGAAAAGGTGCACGTAGCGGTTGGGAAAACGGTTCAGAAAGCTGTGAACTTGCTTCAATGGGCTTTCACCCACTTCAGAAACAGAGAAATTCTCATACTTCATGTTCATCAACCTTCTTCTGTGATCCCCACTCTATTAGGAAAATTGCCAGCTACCCAAGCAAATCCTAAAGTCGTGTCTGCTTTTAGAAGAGAGGAAAGAGAACAGACCATAAAGCTTTTGGAACAATACGTGAGCATTTGCCTTGCAGCTAAGGTTAAGGCCAGTATTATGATAGCCGAAGCTGACCAAGTCCAGAAAGGGATTGTTGATTTGGTGATCAGGCATGGTATCAGGAAGCTTGTTATTGGAGCTGTACCAGAAAATTGtataaagatgaaaaggaagtCGGGGAAAGCAAATTACACTGCCAAGAATGCTCCCCCATTCTGTGAAATATGGTTTATCTACAAAGGAAAACACATGTGGACCAGAGAAGCTTCTGAAAAACCACATTCTTTGCCTTCATGTTCTCAAACTGTAATTCCAGCTGTGGGAAGCTTGAGATCTAGATCATTTCAAGGTGCTGGGAGGGCATTATTTGACTCAGAGAGTCTTCAATCAAATTCTGCAAGAACTGAAATCTGCAGTGGAATTGGTAGTTGGGTTCAGGGTGGAAACGTTGAAACAGAAACAGTTTTTCCACCCCCAGCATCTAGTTCTAGCAGTAATTCTTCCCCCCAGAGTTCTGCTGAGAGAGATGTGTATTTAGATTCTCGGTCAGAGGTTGAGGAAGAAAGACTTAATGCTCAACTTATTGAAGCCAAAATAGAAGCTGAGGCAGCACGGGACAAGGTGTTTACAGAGCTATTAAACTGCAAAAGGTTGGAAGCTGAAGCCATGGAGGCCATTAGAAAGGtcaatttatttgaatctGCCCATGCATGTGAAGTAAAGCTCAGAAAGGAGGCAGAGGGTGCACTGCGAGCTACAATACAGGAACGACAAAAGCTCTTGGTTGAGAATGAAGAAGTTGCTAGTGAGCTACAGAGGACCATGAGAAATGTTGCTCTTCTAGATAGTCGTGCACATGAAGCAAACCGTAGGCGAGATGAAGCTGCAGATGAACTATCATTAATTCAAGCTTCCATCTCAGCTCTGTGGCATGAAAAGCAGCAGATCAGGCGACAGAAAATGGAAGCTCTCCGCTGGCTTGAGCGGTGGAAAAGTCTTGGACAACTTGGACCTGTATACTGCAATGGGGTCATTGGGTCTGCTGAAGAATTGCCTCAGTTAGCAGAATTTTCGTTGTTAGATCTTCAAAATGCCACGTGCAATTTTTCCGAGAGCTTCAAAATCCTGGAGGGAGCTTATGGTTCTATCTATAAGGGGGAAATGTTGGGTAGAACTGTTGCCATAAGGAAGCTCCATATACATGACATGCAAGGACCAGCAGAGTTTCATCAAGAGGTTCAAGTTCTAGGTAGTCTCCAGCACCCTCATCTATTAACGTTGCTTGGTGTTTGCCCTGAAGCATGGTCGCTTGTATACGAGTACTTGCCCAATGGGAGTCTTCAAGACCTCCTATTCCGGAAAAGTAACATTTCCTCTTTGACATGGAATAACCGAGTGCGGATGATTGCTGAAATTGCTAGTGCTCTTTGCTTCTTACACTCTTCCAAACCTGAAAGTATTGTCCACGGTGATCTGAAGCTTGAAAATATACTTCTTGATTCTGCACTTTGTTGCAAGATATGTGAATTTGGGATATGCAGGTTGGTCAGAGAGGATTCACTCTATTGTCCAAGTTTCCGGTTGAGCACCGAGCCAAAGGGTTCTTTTACATATACAGATCCAGAGTTCCAAAGAAGTGGAATACTAACACCCAAGTCTGATATCTACTCCTTTGGGCTCATCATTTTGCAACTACTCACCGGTAGGACTCCAGTTGGATTGGCAATTGAAGTACGGAAAGCTGTTTCGTGTGGAAATCTGTATTCGATTTTGGATGGTTCATCTGGAGAATGGCCTTCGTCCGTGGCTATACGGTTGGTTGAACTGGGACTGCAATGCTGTCAACAAAATGGTAGGGACAGACCAGAGATAACGCCAACATTGGTGAGAGAATTGGAGCAATTGCATGTTTCAGAAGAGCGAGCCGTGccatcttttttcttgtgtcCCATCCTTCAGGAAATCATGCACGATCCTCAGCTTGCAGCGGATGGATTCACGTACGAAGGGGAAGCCATACGGGAATGGTTGGAAAGTGGGCATGAAACTTCCCCCAtgactaatttaaaattgagtcACCTTCATCTTACTCCCAATCATTCGCTACGTCTCGCCATTCAAGACTGGCTTTGTAAATCCTA 2498 0.4376 MELLKPSHPPQHVATGETFYGFSLPSSLPLGLHGLATSHAVEAIEECDEKVHVAVGKTVQKAVNLLQWAFTHFRNREILILHVHQPSSVIPTLLGKLPATQANPKVVSAFRREEREQTIKLLEQYVSICLAAKVKASIMIAEADQVQKGIVDLVIRHGIRKLVIGAVPENCIKMKRKSGKANYTAKNAPPFCEIWFIYKGKHMWTREASEKPHSLPSCSQTVIPAVGSLRSRSFQGAGRALFDSESLQSNSARTEICSGIGSWVQGGNVETETVFPPPASSSSSNSSPQSSAERDVYLDSRSEVEEERLNAQLIEAKIEAEAARDKVFTELLNCKRLEAEAMEAIRKVNLFESAHACEVKLRKEAEGALRATIQERQKLLVENEEVASELQRTMRNVALLDSRAHEANRRRDEAADELSLIQASISALWHEKQQIRRQKMEALRWLERWKSLGQLGPVYCNGVIGSAEELPQLAEFSLLDLQNATCNFSESFKILEGAYGSIYKGEMLGRTVAIRKLHIHDMQGPAEFHQEVQVLGSLQHPHLLTLLGVCPEAWSLVYEYLPNGSLQDLLFRKSNISSLTWNNRVRMIAEIASALCFLHSSKPESIVHGDLKLENILLDSALCCKICEFGICRLVREDSLYCPSFRLSTEPKGSFTYTDPEFQRSGILTPKSDIYSFGLIILQLLTGRTPVGLAIEVRKAVSCGNLYSILDGSSGEWPSSVAIRLVELGLQCCQQNGRDRPEITPTLVRELEQLHVSEERAVPSFFLCPILQEIMHDPQLAADGFTYEGEAIREWLESGHETSPMTNLKLSHLHLTPNHSLRLAIQDWLCKS 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02507 832 Pfam U-box domain 762 831 IPR003613 GO:0004842|GO:0016567
Bva07g02507 832 ProSiteProfiles Protein kinase domain profile. 488 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02507 832 Coils Coil 306 326 - -
Bva07g02507 832 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 62 168 - -
Bva07g02507 832 Gene3D Transferase(Phosphotransferase) domain 1 561 762 - -
Bva07g02507 832 SMART serkin_6 492 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02507 832 SMART Ubox_2 765 828 IPR003613 GO:0004842|GO:0016567
Bva07g02507 832 Coils Coil 362 417 - -
Bva07g02507 832 MobiDBLite consensus disorder prediction 271 299 - -
Bva07g02507 832 Gene3D HUPs 43 167 IPR014729 -
Bva07g02507 832 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 763 832 IPR013083 -
Bva07g02507 832 MobiDBLite consensus disorder prediction 271 295 - -
Bva07g02507 832 SUPERFAMILY Protein kinase-like (PK-like) 471 748 IPR011009 -
Bva07g02507 832 CDD RING-Ubox_WDSUB1_like 766 807 - -
Bva07g02507 832 ProSiteProfiles U-box domain profile. 761 832 IPR003613 GO:0004842|GO:0016567
Bva07g02507 832 SUPERFAMILY RING/U-box 759 831 - -
Bva07g02507 832 Gene3D Phosphorylase Kinase; domain 1 464 560 - -
Bva07g02507 832 PANTHER OS10G0100500 PROTEIN 36 831 - -
Bva07g02507 832 CDD STK_N 50 200 - -
Bva07g02507 832 Coils Coil 334 354 - -
Bva07g02507 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Bva07g02507 832 PANTHER OS02G0152300 PROTEIN 36 831 - -
Bva07g02507 832 Pfam Protein tyrosine and serine/threonine kinase 494 744 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02507 Bva-Chr7 20071612 20076813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02507 48 829 U-box Gene Family AT2G45910 38.224 1.49e-174 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bva07g02507 PK_Tyr_Ser-Thr 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02507 - - gmx:100788846 1186.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00136 09 632420 637317 Bva07g02507 07 20071612 20076813 BWGD
Bva07g02507 07 20071612 20076813 Bva07g02507 07 20071612 20076813 ECH