Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02485 ATGCGTTCAACGGCGTGTGGCTTCGCCGGGAATTTCAACATATACCGTCGTGATATAACTTTCTGGTCAGATTTCTGGCCATCATTGAGGTTAAGGATCGTCCAATTTCTTCCTCAGTCCTCCACTACCGAGTCCTTCCAAAACAAGGGATTTTGGATGGTAAGGGGTACTGGACACATTAATGACAGGGAGACGTCATTTGATAATCCATCCAAAATTGAACTGAAGCGATCTCATGAATGGTTTGATGACACTGCTGAAGTAGATTTTTTCCCAAACAAGAAGCAAGCAATGGAAGATCCAAATGGAAAATCAAGTTCAGGAATTCCAAATGCAAATTTTTCTCCTTGGGAGAACAATCCCACTTTCCAGTCTGTTCCAACTCAATATATTGGCCGGTTATTTGGATCTGATACTAGGTCTGTCAATTTTATGGACAAGAGTACATCATTTGATGCAGTTGCTGATTCTAGTGCGAGAACAAAGATTATTAATAACCACTATGGAGAAGATGCATCTTTTGGCTTGTCTATATCTCATTCTGTTGAAGATTCTGAGGCATGCCTAACTTTTGGTGGAATTAAAAGAGTCAAAGTAGGTCGGGTTAAAGATTCTGATGGTGTACAAGCTCCGGAGGGACTTAATTTTAGTAGACAGAGTAATGGTGACATACATCAGGTCTATAACAGGGAAGTTGAAACATCATCTGTAACATTGGGGCAAGCCtttaataatgatgatgatggtgtCTCTTTAATGGGACACTCACATACCTACAACAGAGGGGATGCCCATGTTATATCACAAGGGGCAACCTATATCAAAGGAAATGACAGTGTCATATCGATTGATGATTCATATAATAAAGAGGacacaaatataatttcttttggtggATTCCCAGATGAGCAAGATATTATCCCTGTTGGCAGGTCTGCTAGGGACTATGATCCGATATATAGTCAATCTTCAGTTCAAGTGTCAAAAACTGCTCCGGAAAAAGAGTTTGACGCATCAAATTCCAATGCAGCGGTAAGTTCTCCTCTGGCAGCTAAACTGAAGTCTGAATCTGCGCCCAAGTATATGAAACCAGagttcaaaaagaaagaatctcCAAATAGCTTCCCTTCTAATGTCAGAAGCTTGATATCTACTGGTATGCTTGACGGTGTTCCTGTGAAATATGTCTCAGTGGCCCGAGAGGAGCTTCGTGGAATTATAAAAGGTTCTGGCTATCTTTGCGGATGTCAGTCCTGTAACAATACCAAGGTTCTCAATGCTTATGAATTTGAGAGACATGCTGCTTGCAAAACGAAACATCCAAACAATCACATTTACTTTGAGAATGGAAAGACCATATATCAGATTGTACAGGAACTGAGGAATACCCCTGAAAGCTCCTTGTTTGATACAATTCAAACAGTTTTTGGTGCACCAATTAATCAGAAAGCTTTTCGCATTTGGAAAGAATCATTTCAAGCAGCAACACGCGAGCTTCAACGAATTTACGGAAAACAAGAACTAAACATGACTGTCAAAACGTA 1544 0.3886 MRSTACGFAGNFNIYRRDITFWSDFWPSLRLRIVQFLPQSSTTESFQNKGFWMVRGTGHINDRETSFDNPSKIELKRSHEWFDDTAEVDFFPNKKQAMEDPNGKSSSGIPNANFSPWENNPTFQSVPTQYIGRLFGSDTRSVNFMDKSTSFDAVADSSARTKIINNHYGEDASFGLSISHSVEDSEACLTFGGIKRVKVGRVKDSDGVQAPEGLNFSRQSNGDIHQVYNREVETSSVTLGQAFNNDDDGVSLMGHSHTYNRGDAHVISQGATYIKGNDSVISIDDSYNKEDTNIISFGGFPDEQDIIPVGRSARDYDPIYSQSSVQVSKTAPEKEFDASNSNAAVSSPLAAKLKSESAPKYMKPEFKKKESPNSFPSNVRSLISTGMLDGVPVKYVSVAREELRGIIKGSGYLCGCQSCNNTKVLNAYEFERHAACKTKHPNNHIYFENGKTIYQIVQELRNTPESSLFDTIQTVFGAPINQKAFRIWKESFQAATRELQRIYGKQELNMTVKT 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02485 514 Pfam Tify domain binding domain 405 460 IPR032308 -
Bva07g02485 514 PANTHER AUTOIMMUNE REGULATOR 47 510 - -
Bva07g02485 514 PANTHER DNA-BINDING PROTEIN 47 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02485 Bva-Chr7 19957875 19962364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02485 366 493 PHD Transcription Factor Family AT3G53680 55.039 9.09e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02485 - - gmx:100802229 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02485 07 19957875 19962364 Bva07g02485 07 19957875 19962364 ECH
Bva09g00157 09 735433 738443 Bva07g02485 07 19957875 19962364 ECH