Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02484 ATGAAGAGAAGCAGAGACGACGGTGAGATAGAGAGTTTAGACATGGCTGATTGTTTGATGTTACTATCTAAAGTTGGCGAAACGAAGCCATCAAGAGAGTTGAAGAGTCATAATGGTGGAGGTTTTAAGTGCAAAACTTGTAATAGGCAGTTCCCTTCTTTTCAAGCCCTTGGAGGCCACAGAGCAAGCCACAAGAAACCCAAGCTCATGGGCGTAGGAGACCTTTTGGCAAACTCGGCAGTGAAGCAAAAGATGCACGGGTGTCCTATTTGTGGTGTTGAATTTGCGATTGGTCAAGCTCTAGGAGGGCACATGAGAAAGCACAGGGCTGAACTTAATCACGGTTTGATGAGTCATGCCGTGAAGGATGCTAAGCCAGTTTTGAAGAAATCGACTAGTAGGAAGATTTTGTGCTTGGATTTGAACTTAACGCCCTTAGAAAATGATCTGAAGCTCAACTTAAGGGCACCGGTGCTGAATTATTTcgttta 491 0.4399 MKRSRDDGEIESLDMADCLMLLSKVGETKPSRELKSHNGGGFKCKTCNRQFPSFQALGGHRASHKKPKLMGVGDLLANSAVKQKMHGCPICGVEFAIGQALGGHMRKHRAELNHGLMSHAVKDAKPVLKKSTSRKILCLDLNLTPLENDLKLNLRAPVLNYFV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02484 163 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Bva07g02484 163 PANTHER CYS2-HIS2 ZINC FINGER TRANSCRIPTION FACTOR 7 155 - -
Bva07g02484 163 ProSitePatterns Zinc finger C2H2 type domain signature. 44 64 IPR013087 -
Bva07g02484 163 Pfam C2H2-type zinc finger 42 67 - -
Bva07g02484 163 Pfam C2H2-type zinc finger 86 111 - -
Bva07g02484 163 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 113 IPR013087 -
Bva07g02484 163 Gene3D Classic Zinc Finger 39 108 - -
Bva07g02484 163 SMART c2h2final6 42 64 IPR013087 -
Bva07g02484 163 SMART c2h2final6 86 108 IPR013087 -
Bva07g02484 163 SUPERFAMILY beta-beta-alpha zinc fingers 42 108 IPR036236 -
Bva07g02484 163 PANTHER ZINC FINGER PROTEIN ZAT5 7 155 - -
Bva07g02484 163 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 69 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02484 Bva-Chr7 19956163 19956866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02484 1 151 C2H2 Transcription Factor Family AT2G37430 48.148 1.45e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva07g02484 zf-C2H2_6 9.1e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02484 - - qsu:112033018 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02484 07 19956163 19956866 Bva07g02484 07 19956163 19956866 ECH