Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02479 atGCCGATTTCCAGAATTGCCATTGGAAATGCATCGGAGTTTGGCCAAAGCGATGCTCTTAAAGCGGCACTTGCTGAGTTCATCTCAATGCTCATCTTTGTCTTTGCTGGCGAAGGCTCTGGCATGGCATTCAACAAGCTCACCAACAATGGTTCAACAACACCAGCAGGGTTAGTGGCAGCATCGCTGGCTCATGCCTTGGCACTGTTTGTGGCTGTCTCTGTTGGTGCTAACATTTCTGGTGGGCATGTGAACCCTGCTGTTACATTTGGTGCCTTCGTTGGTGGTCACATCTCCCTCCTTAGGAGTGTTTTGTATTGGATTGCTCAGTTGCTCGGCTCTGTCGTTGCTTGCTTGCTCCTCAAATTCTCCACGGGTGGACTGGAAACATCTGCATTTGCCCTTTCTTCTGGGGTGGGTGCATGGAATGCGGTTGTCTTTGAAATCGTGATGacttttggtttggtttacACGGTGTATGCTACTGCCGTTGACCCAAAGAGGGGTGACATTGGGATCATTGCTCCAATTGCAATTGGTTTCATTGTGGGTGCTAACATCTTGGCTGGCGGTGCCTTTGATGGTGCATCAATGAACCCGGCAGTGTCTTTTGGACCCGCAGTTGTTAGCTGGACATGGGATAACCACTGGGTCTACTGGCTTGGCCCATTTGTTGGTGCTGCCATTGCTGCCATTGTCTACGAGATTTTCTTCATTGACCAAAACACCCACGAACAGCTCCCAACAACTGACTATTA 758 0.4855 MPISRIAIGNASEFGQSDALKAALAEFISMLIFVFAGEGSGMAFNKLTNNGSTTPAGLVAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGHISLLRSVLYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKRGDIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWDNHWVYWLGPFVGAAIAAIVYEIFFIDQNTHEQLPTTDY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02479 252 SUPERFAMILY Aquaporin-like 18 243 IPR023271 -
Bva07g02479 252 TIGRFAM MIP: MIP family channel proteins 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02479 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02479 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02479 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02479 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02479 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02479 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02479 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02479 252 PANTHER AQUAPORIN-8 1 252 IPR034294 -
Bva07g02479 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Bva07g02479 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Bva07g02479 252 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02479 252 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02479 Bva-Chr7 19924517 19925741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02479 1 252 Major Intrinsic Protein MIP AT4G01470 78.571 8.14e-144 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02479 K09873 - tcc:18590755 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00163 09 767836 769060 Bva07g02479 07 19924517 19925741 BWGD
Bva07g02479 07 19924517 19925741 Bva07g02479 07 19924517 19925741 ECH
Bva09g00163 09 767836 769060 Bva07g02479 07 19924517 19925741 ECH