Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02461 ATGTATTCACCTTCCAACTCCACATTCTTACGCGTCGCCGGCCATTTGCCGTCGCCAGATGCGGCCATGCCAACACCCCTTCCATCGTCAGCTCCAGCTCCACTAATGCACTCCACTTCTCAGTGCCCCGACCAACTCGCCCTCAACGAGTTTGACTCAGTGCACGACACTCTCTCGCAACTCAACTCGAGGTGGAGCCACAACAGCTGCAGTAGCGGTTGTAGCAGCTATGGCTCGCCCAGTCCTCTGGCGAGTTACCGAACTCAACGGCCTAGTCTTATGCAGAGGAGCGTAAGCAGCCATGCTCTGATGAAGAATGGGGTCCACCACCCCGTTTCTGCGTTATTTGCTGAGTTGTTGTATTCGGAGAACGGTCCGGTTCGGAGAGTTTACAGTACTGGTGATTTACAGAGAATTAAGGGAATCCAACATAATCATCAGTCAGATAGTCCATTATCATGCGAAAGCAGCATGATCGTAGAAGGAATGAGCAGAGCCTGTCGTTATAGCCCGGAGGAGAAGAAGGTGAGGATTGAAAGGTATAGAAACAAGAGAAATCAGAGGAACTTCAACAGGAAAATTAAGTATACTTGCAGGAAGACATTGGCAGATAGCAGGCCCCGCATCAGAGGAAGATTTGCTAGGAATGAAGAAATTGACAAAAGCACAGTTGAGTGGAGCAATATAGGTGGcggagaggaagaagatgagcAAGATGAAAACTGGGTCAACTTGTTTGATGCCTTGGTTGCTGCAAGTCTTGTTCAGGAGCATCAAGATAATTCCTCTGTAGGCCTAATGTCTTA 806 0.4752 MYSPSNSTFLRVAGHLPSPDAAMPTPLPSSAPAPLMHSTSQCPDQLALNEFDSVHDTLSQLNSRWSHNSCSSGCSSYGSPSPLASYRTQRPSLMQRSVSSHALMKNGVHHPVSALFAELLYSENGPVRRVYSTGDLQRIKGIQHNHQSDSPLSCESSMIVEGMSRACRYSPEEKKVRIERYRNKRNQRNFNRKIKYTCRKTLADSRPRIRGRFARNEEIDKSTVEWSNIGGGEEEDEQDENWVNLFDALVAASLVQEHQDNSSVGLMS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02461 268 MobiDBLite consensus disorder prediction 13 39 - -
Bva07g02461 268 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 44 267 IPR045281 GO:0009909
Bva07g02461 268 Pfam CCT motif 176 216 IPR010402 GO:0005515
Bva07g02461 268 PANTHER CCT MOTIF PROTEIN 44 267 - -
Bva07g02461 268 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02461 Bva-Chr7 19836191 19837767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02461 170 221 C2C2-CO-like Transcription Factor Family AT5G15850 44.231 3.22e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva07g02461 CCT 1.5e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02461 - - gmx:102661609 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00182 09 875843 878110 Bva07g02461 07 19836191 19837767 BWGD
Bva07g02461 07 19836191 19837767 Bva07g02461 07 19836191 19837767 ECH