Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02458 ATGGAAAAGTCAGATAAATCAGCAAAGCAATCATCGTCACAAAGACCCCCTTTTCCCAGAGAACCTCGTGGTTCTCTCGAAGTCTTCAATCCTTCCTCCTATGCAGAGGACAAGACAACCAACTTGCCGTTCCGTTCGCAGCCCAAGTGGAAAAGCTTGTTGGAGCCAAAAGCCAGCCACGAGCCAGAACCAACCAAGCTCTCCCCTTTCAATTCTGATTTAGCAGATGAAATTACAAGCACTGCATGGATGGCCCTTAAGGAATCCAACCCACCCCCACAATCGTCGTCACCGCCCCCTCAACAGAccctttcttctattttcaaCGACCACGCCGAGCGGGGCCAGAAGTCGCCAGCCATCACCAACCATTTGTCTGGAGAAGTCGGTGCGGCGGCGCAGAGAGCCGCAGAGTGGGGTTTGGTGCTGAAAACTGACACGGAGACAGGAAAGCTGCAGGGAGTGGCCGTTAGGAACTCCGGCGGGGACGAACCAAATGATAAAGAGGCGGGAACTTCGAGAAGGAACTCGAACAACTCGGTAAGAAGCTCCGGCGACTCGTCGGACGACGGAGGAAGAGAATTCCTCCGAGGAATTCCAAGAATTTCCGAGGACTTGAAGGATGCTTTATCTACGTTCCAACAAACTTTTGTTGTCTCCGATGCCACTAAACCTGATTTTCCGATCTTGTATGCAAGTGCTGGGTTCTTCAAGATGACGGGTTATACATCCAAGGAAGTCATAGGGAGGAATTGTCGTTTTTTACAGGGAGCGGGAACATATCCGGAGGAGGTGGCAAAGATAAGGGAAGCGTTGCAAGAAGGGAGGAGTTACTGTGGGAGGCTACTCAACTACAAGAAGGATGGGACGCCATTTTGGAACCTTCTCACAATTGCGCCGATCAAAGACGAAAGTGGGAAAGTCCTCAAATTTATTGGAATGCAAGTGGAGGTTAGCAAACATACGGAGGGTTCCAGGGATAAGATGCTACGTCCCAATGGATTGCCCGAGTCCTTGATTCGATATGATGCTCGTCAGAAAGAGAAGGCTACCAGTTCGGTAACAGAACTGCTGACGGCCGTGAAGCGGCCCCGGGCACTAAGTGAATCAGCGGACCGTCCTCTGATGATAAAATCGGGAGGTggtgaagaagagaaaacagaaaatgcatCAAGGAGAAAATCAGAGAGTATGGCTTCATTTAGACTCAAATCACATGCGGAAGGTAGAAAGTCAATGCAGCGAATCATTGAGCTGCcggaaaagaaacagaaaaattcaCGTCGCCGTTCTTTAATGGGattcattaaaaaaaatcagtccATTGACGATAGTTTGGACAATGAACTATATGAGGAGGAGAGCTCTGAGAGTGAGAGAGATGAGGGGCCAGATAATTTAGATGACGAAGTAATGCATAGGGAAAAGAGGAAGGGTTTTGATCTTGCTACAACACTTGAACGTATTGAGAAGAACTTTGTCATTACTGATCCAAGGCTGCCTGACAATCCCATAatttttgcATCTGATAGCTTTCTGGAGCTTACTGAGTACAGTCGTGAAGAAATCTTGGGAAGAAATTGCAGATTTCTGCAAGGGCCTGAGACTGACCCCGCAACCGTGAGAAAAATTAGAGAGGCAATTGACAACCAATCAGAAGTTACCGTGCAACTAATAAACTATACGAAGAGCGGTAAAAAGTTCTGGAACCTCTTTCATCTGCAACCAATGCGTGATCACAagGGTGATGTACAGTATTTTATTGGTGTTCAACTTGATGGCAGTAGGCACGTGGAGCCTCTTCACAACTGTATTGCAGAAAATACTGCAAAGGAGGGTGAAAAACTGGTCAAAAAAACTGCAGAAAATGTTGATGACGCAGTGAGAGAACTTCCGGATGCTAATATGACACCAGAAGACTTATGGATGAATCATTCGACAGTGGTTCACCCAAAACCCCATAGGAGGCATGATCCCGCCTGGAGAGCTATCCAGAAGATTCTAGATAGTGGAGAACAGATTAGCTTAAAGCATTTCAGGCCAATAAAACCACTGGGAGCTGGGGATACTGGCAGTGTGCATCTGGTGGAGCTTTGTGGAACAAATCAATATTTTGCTATGAAGGCTATGGATAAGGGTGTTATGCTCAATCGTAATAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTTGACATGTTGGATCACCCTTTTCTTCCGGCATTATATGCCTCTTTTCAGACCAAAACACATGTTTGTCTGATAACTAATTACTGTCCTGGTGGAGAACTGTTTATGCTTCTTGACCGACAGCCAAAAAAGGTTCTCAAGGAAGATGCAGTGAGATTTTACGCTGCAGAAGTAGTAGTTGCATTAGAGTACCTTCATTGTCAAGGTATAATATACAGAGATTTGAAGCCAGAAAATGTGTTACTCCACAGCAATGGGCATGTCTCTCTGACAGATTTTGATTTATCATGTTTAACATCTAGCCAACCACAGCTTTTGATTCCAGCTAcgaatgaaaagaagaaaaaacagaaaggTCATCAGGCTCCAATATTTATGGCTGAGCCTATGAGAGCATCAAATTCTTTTGTGGGCACAGAGGAGTACATAGCCCCGGAAATAATAACAGGTTCAGGCCATACCAGTGCTGTGGACTGGTGGGCTCttggtATTCTTCTATATGAAATGTTTTATGGATATACACCATTTAGGGGAAAGACAAGGCAAAAAACATTTGCAAATATACTTCGCAAGGAtcttaaatttctcaaaaatcgaCAGGTAAGTTTCCATGCAAAGCAATTGATGTACCGGTTGTTGCACAGAGATCCCAAAAGTAGGTTGGGTTCAAAGGAAGGAGCAAATGAAATTAAGCGTCACCCATTCTTCCGAGGAGTCAATTGGGCCCTAGTTCGTTGCATGAACCCTCCTGAGCTTGAAGCTCCTCTCTTTGGGGCaactgaagaagaaaaggagccCGATGCTGTGGATCCTGCATTGGAGGATCTACAGACAAATGTTTTCTG 3035 0.4349 MEKSDKSAKQSSSQRPPFPREPRGSLEVFNPSSYAEDKTTNLPFRSQPKWKSLLEPKASHEPEPTKLSPFNSDLADEITSTAWMALKESNPPPQSSSPPPQQTLSSIFNDHAERGQKSPAITNHLSGEVGAAAQRAAEWGLVLKTDTETGKLQGVAVRNSGGDEPNDKEAGTSRRNSNNSVRSSGDSSDDGGREFLRGIPRISEDLKDALSTFQQTFVVSDATKPDFPILYASAGFFKMTGYTSKEVIGRNCRFLQGAGTYPEEVAKIREALQEGRSYCGRLLNYKKDGTPFWNLLTIAPIKDESGKVLKFIGMQVEVSKHTEGSRDKMLRPNGLPESLIRYDARQKEKATSSVTELLTAVKRPRALSESADRPLMIKSGGGEEEKTENASRRKSESMASFRLKSHAEGRKSMQRIIELPEKKQKNSRRRSLMGFIKKNQSIDDSLDNELYEEESSESERDEGPDNLDDEVMHREKRKGFDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQSEVTVQLINYTKSGKKFWNLFHLQPMRDHKGDVQYFIGVQLDGSRHVEPLHNCIAENTAKEGEKLVKKTAENVDDAVRELPDANMTPEDLWMNHSTVVHPKPHRRHDPAWRAIQKILDSGEQISLKHFRPIKPLGAGDTGSVHLVELCGTNQYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITNYCPGGELFMLLDRQPKKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLHSNGHVSLTDFDLSCLTSSQPQLLIPATNEKKKKQKGHQAPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMFYGYTPFRGKTRQKTFANILRKDLKFLKNRQVSFHAKQLMYRLLHRDPKSRLGSKEGANEIKRHPFFRGVNWALVRCMNPPELEAPLFGATEEEKEPDAVDPALEDLQTNVF 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02458 1011 MobiDBLite consensus disorder prediction 152 195 - -
Bva07g02458 1011 SUPERFAMILY PYP-like sensor domain (PAS domain) 494 593 IPR035965 -
Bva07g02458 1011 ProSiteProfiles Protein kinase domain profile. 679 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02458 1011 PANTHER FLIPPASE KINASE 1-RELATED 148 1011 - -
Bva07g02458 1011 CDD PAS 493 593 IPR000014 -
Bva07g02458 1011 TIGRFAM sensory_box: PAS domain S-box protein 503 593 IPR000014 -
Bva07g02458 1011 TIGRFAM sensory_box: PAS domain S-box protein 225 322 IPR000014 -
Bva07g02458 1011 Gene3D PAS domain 216 372 - -
Bva07g02458 1011 ProSiteProfiles PAS repeat profile. 482 551 IPR000014 -
Bva07g02458 1011 SMART pac_2 555 597 IPR001610 -
Bva07g02458 1011 SMART pac_2 279 321 IPR001610 -
Bva07g02458 1011 Gene3D Transferase(Phosphotransferase) domain 1 763 975 - -
Bva07g02458 1011 MobiDBLite consensus disorder prediction 446 465 - -
Bva07g02458 1011 MobiDBLite consensus disorder prediction 32 47 - -
Bva07g02458 1011 Gene3D Phosphorylase Kinase; domain 1 678 762 - -
Bva07g02458 1011 MobiDBLite consensus disorder prediction 1 123 - -
Bva07g02458 1011 CDD PAS 225 318 IPR000014 -
Bva07g02458 1011 ProSitePatterns Protein kinases ATP-binding region signature. 685 708 IPR017441 GO:0005524
Bva07g02458 1011 CDD STKc_phototropin_like 677 985 - -
Bva07g02458 1011 Gene3D PAS domain 467 631 - -
Bva07g02458 1011 Pfam Protein kinase domain 681 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02458 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Bva07g02458 1011 MobiDBLite consensus disorder prediction 72 91 - -
Bva07g02458 1011 ProSiteProfiles PAS repeat profile. 202 274 IPR000014 -
Bva07g02458 1011 SUPERFAMILY Protein kinase-like (PK-like) 661 986 IPR011009 -
Bva07g02458 1011 MobiDBLite consensus disorder prediction 378 428 - -
Bva07g02458 1011 Pfam PAS domain 501 593 IPR000014 -
Bva07g02458 1011 Pfam PAS domain 223 319 IPR000014 -
Bva07g02458 1011 SMART serkin_6 679 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02458 1011 MobiDBLite consensus disorder prediction 172 186 - -
Bva07g02458 1011 PANTHER PHOTOTROPIN-1 148 1011 - -
Bva07g02458 1011 SUPERFAMILY PYP-like sensor domain (PAS domain) 223 315 IPR035965 -
Bva07g02458 1011 SMART pas_2 480 549 IPR000014 -
Bva07g02458 1011 SMART pas_2 204 273 IPR000014 -
Bva07g02458 1011 MobiDBLite consensus disorder prediction 444 473 - -
Bva07g02458 1011 ProSiteProfiles PAC domain profile. 552 606 IPR000700 -
Bva07g02458 1011 MobiDBLite consensus disorder prediction 368 429 - -
Bva07g02458 1011 ProSiteProfiles PAC domain profile. 276 330 IPR000700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02458 Bva-Chr7 19814015 19826155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02458 1 1011 AGC Kinase Gene Family AT3G45780 69.679 0.0 1380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva07g02458 Pkinase 4.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02458 K20715 - jre:108989640 1526.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00186 09 903875 914123 Bva07g02458 07 19814015 19826155 BWGD
Bva07g02458 07 19814015 19826155 Bva07g02458 07 19814015 19826155 ECH