Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02456 ATGTCAAATCATCTTACTGAAGCAGATACGGTCAAAGTCGATTTGAATGTCAATGGTGAGAAGGAAGCTGTCTCTAAGGATGATCAACTTTCTCTGGAcgtgaataatttaaatttgaaagaagaGGTTTCCAGGGATGAAACAGGTAATGGTTACCGGGCAAAGACATTTACGTTCGAAGAACTTGCGGCTGCAACAGGAAATTTTAGGTCTGATTGTTTTTTGGGTGAAGGAGGGTTTGGGAAGGTTTACAAGGGGCACTTGGATAGAATAAACCAGGTTGTAGCTATCAAACAACTTGACCCTAATGGACTTCAAGGAGTTAGGGAATTTGTGGTTGAAGTGTTGACATTGAGTCTAGCAGATCATCCTAATCTTGTCAAATTGTTTGGCTTTTGTGCTGAGGGAGAGCAGAGGTTATTAGTTTATGAGTACATGCCATTAGGATCTTTGGAGAACCATTTGCATGATCTTCCACCTGGTAGAAAAGCTATTGATTGGAATACAAGGATGAAAATAGCAGCTGGTGCAGCTAGGGGTTTGGAATATTTGCACGATAAAATGAAGCCTCCTGTCATATATCGTGACCTAAAATGCTCAAACATTCTGCTAGGCGAGGGATATCATCCCAAGTTATCTGATTTTGGCTTGGCAAAAGTTGGCCCAAGCGGTGATAAAACTCATGTTTCAACAAGGGTTATGGGCACTTATGGGTATTGTGCTCCAGATTATGCAATGACGGGTCAGTTGACATTCAAGTCGGATATTTACAGCTTTGGGGTTGTTCTTCTGGAGCTCATTACAGGCAGGAAAGCCATTGACCACACGAAATCTGCCAGAGAACAAAATCTGGTAGCATGGGCAAGGCCATTATTCAAAGACAGGAAAAAGTTCTCACAAATGGTTGACCCATTGCTTGAGGGTCAATACCCCGTGAGAGGTTTGTACCAAGCTCTTGCTATTGCTGCAATGTGCGTTCAAGAGCAGCCTAATATGCGGCCCGTTATAGCTGATGTGGTTACAGCCCTAAATTACCTTGCTTCCCAGAAATATGATCCCCAAAGTCATCCAGTACAAAGCTGCAAAAGAAGCCCGTCTTCTCCGAAAGTAAGAAGGGATGATGACCTTACACATGTTGGTAATGGGGATCAGACGGATAGATCTGAAGACTG 1172 0.4232 MSNHLTEADTVKVDLNVNGEKEAVSKDDQLSLDVNNLNLKEEVSRDETGNGYRAKTFTFEELAAATGNFRSDCFLGEGGFGKVYKGHLDRINQVVAIKQLDPNGLQGVREFVVEVLTLSLADHPNLVKLFGFCAEGEQRLLVYEYMPLGSLENHLHDLPPGRKAIDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHTKSAREQNLVAWARPLFKDRKKFSQMVDPLLEGQYPVRGLYQALAIAAMCVQEQPNMRPVIADVVTALNYLASQKYDPQSHPVQSCKRSPSSPKVRRDDDLTHVGNGDQTDRSED 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02456 390 Gene3D Transferase(Phosphotransferase) domain 1 146 364 - -
Bva07g02456 390 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Bva07g02456 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Bva07g02456 390 SMART serkin_6 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02456 390 SUPERFAMILY Protein kinase-like (PK-like) 55 361 IPR011009 -
Bva07g02456 390 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 6 375 - -
Bva07g02456 390 ProSiteProfiles Protein kinase domain profile. 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02456 390 MobiDBLite consensus disorder prediction 366 390 - -
Bva07g02456 390 Gene3D Phosphorylase Kinase; domain 1 39 145 - -
Bva07g02456 390 PANTHER OS07G0668900 PROTEIN 6 375 - -
Bva07g02456 390 Pfam Protein kinase domain 74 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02456 390 MobiDBLite consensus disorder prediction 352 390 - -
Bva07g02456 390 CDD STKc_IRAK 75 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02456 Bva-Chr7 19805407 19808353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02456 47 348 Glycoside Hydrolase AT3G07070 63.576 3.86e-144 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bva07g02456 Pkinase 8.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02456 - - gmx:100804000 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00188 09 919551 922954 Bva07g02456 07 19805407 19808353 BWGD
Bva07g02456 07 19805407 19808353 Bva07g02456 07 19805407 19808353 ECH
Bva09g00188 09 919551 922954 Bva07g02456 07 19805407 19808353 ECH
Bva01g00451 01 3612952 3616612 Bva07g02456 07 19805407 19808353 ECH