Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02455 ATGTGGGCTGCTCCAATGAACGACAATGTAGTTGGGGGAAGAGGTTTGGTGGATCCAAATCCCCTATTTTCTGAGAGACTCAATACTGACGTAGTTAATAGAGGACAAGGCTCGGGTTCATCTGCTGAAGATGATGCAAGATTTAGTAAGGTAACTGAAGATGGAAAGAGTGGGGTGAGGGGGCTGATTCAAGTCCATGAGAGTTTGCGCACATCACCACAACCACCTGTAGGGCCGTCGATACACTGGGAGAAGTTTCTTCCCTTAAGATCAATAAAAGTACTGCTGGTGGAAGATGATGACTCAACACGCCATGTCGTGGGTGCTCTTCTACGAAATTGCAGTTATGAAGTCACTGCTGTTTTGGATGGTCTTCAAGCATGGCAAATACTGGAAGATCCCAGCAATCACATTGATCTCATTCTAACAGAGGTAGCTATGCCTTTTCTGTGCGGAATGGGTCTTTTGTGCAAAATCATGAGCCACAAAACTCTCAAGAATATCCCTGTAATTATGATGTCATCTCATGATTCTATGGGTATAGTCTTTAAGTGTTTGTCAAAGGGTGCGGCTGATTTTTTAGTCAAACCTATTCGGAGGAATGAACTTAAAAACCTGTGGCAGCATGTTTGGAGAAGATACAAGTGCAACAGTTATAGTGGTAGTGGGAGTGAAAGTGGAACGCACACCAGAAAATCTGCTAAGTCAAGAAGTAATGATGCATCTGAAAACGGTAGTGACAACAGTAATGAGAATGACTTTGCGAATATAGGCTTGAGTCTTCGAGATGGAAGTGACAATGGAAGTGGTACTCAGAGTTCATGGACTAAATTTCCGGTTGAAGTTGGCAGCCCTCTCCCAATTTCACCTCACAAACTCTTGGTTGACGCTACTGACAGTACATGTGCCCAAGTGATGCACACAAAGCCTGAAAAAGTTAGTAGTAGGTGGGTGCATGCAACAGAAAACGAGTGTCATGGACAGAATGACCAACTTGGGGATGTTGGAATGGGCAAAGACCTGGGTGTGGGACATCAATTTGAGGAGTTATCTACCCATTCAACAGGCAAAAGGATATATAAGATGTCTGATGCACAAGGTAAGAAACTCAATAGAGGACATGACATTGTTTGTGAAAAAGGACAGCTGGTGTACAACAGTGACAAAATCAGGACCAGAAAAGCCCAAGCTATGTATGTTGTTGATGCAATTACTGATAGTAGCAATCCACGGGCTGAAAGCAGAGAGTTGAACAATCCCGATGGTTTATCTGGTATTTCACAAACTAAAGCAAGCTGTTGCTCTAAACCACATCCATCTCTTGAACTAACTCTTAAGAGGCTTGGAGGGGTAGGAGATGATAAAACTGCGGCCGTTGATGAACGTAATGTTTTGAGACATTCAGATTTGTCTGCATTCTCAAGATATAACACTGTTTCTTCTGCTAATCAGGTACAAACAGGAAATGTTGGAAGCTGTTCTCCGTTAGCAAATAGCTCAGTTGGACTATATACAGAAACAGCAAGCAACTTTCCATGTCATTCACATGGCACCTCTCCAAATCAACAGTCCTATGGGAGCAACAACATCAATGACATGGGATCtactaatatatatcttaGCACAAAACTGGATGCTTTTGACAAGAAACCAGAGTCTGTGACTGGGATTGAGTCATTTAATTCTTCTGCACTTCAAACTGTGCAGAACAGTAGTATTTCTTCACCTCAGCAGATAATCTCTGTCAAGGCAGAAAATGCTGAAATGCTAAAAGCACAAGTGGGAGGCTCTGAACAAGGATTCCAAGTGAAGTGTAACCATTGGTCAGCTGAAAGTAAGGCTGGAAACTGCAATGTGGATAGAAGAGCGGTTGAGAGTGATCATGGGAGTAATGGACAGAATGGAAGCGGCAGTACCTTGACTACTAGAGTGATAATAAATGTGGAAAGCGGCAACGGGGCAGCTGGAAGCGTTGGAATTGGGGACGCAGACAGAAAAAACAGTGGCAACAGGGCAGATGAAGGACAGATTTCATTGAGAGAGGCTGCGCTGACCAAATTTcgtcaaaagagaaaagaacgACGCTTTGACAAAAGGGTTCGATACTACAGCAGGAAAAAACTAGCTGAACAACGGCCTCGTATCAGGGGACAATTTGCTCGAAGTACAGTGTCAGacaaaagggaagaaaaagatatcCGGAATGATAATTCTAGTGATGGTCCACCTTG 2231 0.4245 MWAAPMNDNVVGGRGLVDPNPLFSERLNTDVVNRGQGSGSSAEDDARFSKVTEDGKSGVRGLIQVHESLRTSPQPPVGPSIHWEKFLPLRSIKVLLVEDDDSTRHVVGALLRNCSYEVTAVLDGLQAWQILEDPSNHIDLILTEVAMPFLCGMGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHVWRRYKCNSYSGSGSESGTHTRKSAKSRSNDASENGSDNSNENDFANIGLSLRDGSDNGSGTQSSWTKFPVEVGSPLPISPHKLLVDATDSTCAQVMHTKPEKVSSRWVHATENECHGQNDQLGDVGMGKDLGVGHQFEELSTHSTGKRIYKMSDAQGKKLNRGHDIVCEKGQLVYNSDKIRTRKAQAMYVVDAITDSSNPRAESRELNNPDGLSGISQTKASCCSKPHPSLELTLKRLGGVGDDKTAAVDERNVLRHSDLSAFSRYNTVSSANQVQTGNVGSCSPLANSSVGLYTETASNFPCHSHGTSPNQQSYGSNNINDMGSTNIYLSTKLDAFDKKPESVTGIESFNSSALQTVQNSSISSPQQIISVKAENAEMLKAQVGGSEQGFQVKCNHWSAESKAGNCNVDRRAVESDHGSNGQNGSGSTLTTRVIINVESGNGAAGSVGIGDADRKNSGNRADEGQISLREAALTKFRQKRKERRFDKRVRYYSRKKLAEQRPRIRGQFARSTVSDKREEKDIRNDNSSDGPP 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02455 743 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 34 715 - -
Bva07g02455 743 Pfam CCT motif 680 722 IPR010402 GO:0005515
Bva07g02455 743 MobiDBLite consensus disorder prediction 219 278 - -
Bva07g02455 743 MobiDBLite consensus disorder prediction 704 743 - -
Bva07g02455 743 ProSiteProfiles Response regulatory domain profile. 93 211 IPR001789 GO:0000160
Bva07g02455 743 MobiDBLite consensus disorder prediction 239 278 - -
Bva07g02455 743 SUPERFAMILY CheY-like 91 215 IPR011006 -
Bva07g02455 743 ProSiteProfiles CCT domain profile. 680 722 IPR010402 GO:0005515
Bva07g02455 743 PANTHER TWO-COMPONENT RESPONSE REGULATOR 34 715 IPR045279 GO:0009736
Bva07g02455 743 MobiDBLite consensus disorder prediction 31 45 - -
Bva07g02455 743 MobiDBLite consensus disorder prediction 721 737 - -
Bva07g02455 743 SMART REC_2 92 207 IPR001789 GO:0000160
Bva07g02455 743 MobiDBLite consensus disorder prediction 31 50 - -
Bva07g02455 743 CDD psREC_PRR 94 197 - -
Bva07g02455 743 Pfam Response regulator receiver domain 94 205 IPR001789 GO:0000160
Bva07g02455 743 MobiDBLite consensus disorder prediction 652 674 - -
Bva07g02455 743 Gene3D - 91 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02455 Bva-Chr7 19792724 19799167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02455 76 493 Response Regulator Gene Family AT5G60100 46.262 3.38e-89 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Bva07g02455 Response_reg 8.3e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02455 K12129 - gmx:100803462 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02455 07 19792724 19799167 Bva07g02455 07 19792724 19799167 ECH
Bva02g01347 02 17202288 17207383 Bva07g02455 07 19792724 19799167 ECH