Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02450 ATGCTAGATCTTAATCTCAATGCGGATTCGAACGATTCGACTCAGAACGATGAATCGTTCATGTACCTCGACAAATTTCCTGAAGCTTCTGGGAATCAAAGGGCAGAATCGGGGACTTCCAATTCCTCTGTCGTCAATGCTGACTGGTCCAGCAATGGAGGAGGCGATGAAGACTCTTGCTCTACCCGTACCGGCGACGTTTACACCTTCAATTTCGATATCCTTAAGGTAGATGGCGGGAACGATGACTCAACCAAGGAGCTGTTTCCGGTGAATGGAGCTAGAGGAGTGGACGGAGAGTCCGGGCTTTGGCAGGGACAGTCTTCGTCGTCGTTTCCATCGAGTAAGAGCAGGATGGATCTCTCATTCGATAATCCAGGTGGGGACAGAGAGATGACGATGGTTCAGCTGCAACAACAACCCCAACAGCCCATAAAGAAGAGCCGGAGGGGTCCGAGGTCTCGGAGCTCGCAGTACAGAGGGGTCACCTTCTACAGGAGGACCGGAAGATGGGAATCACATATCTGGGATTGCGGGAAACAAGTGTATTTGGGTGGATTTGACACTGCTCATGCCGCTGCTAGAGCATATGATCGAGCTGCTATTAAGTTCAGGGGAGTCGACGCTGACATCAATTTCAACCTCACTGATTACGAGGAGGATCTAAAACAGATGAAGAATCTCACCAAGGAGGAATTCGTGCACATACTTCGTCGCCAGAGTACTGGTTTCTCAAGGGGAAGTTCAAAATACCGAGGAGTAACACTGCACAAATGTGGCCGTTGGGAAGCTCGAATGGGACAATTCCTTGGAAAAAAGTATATATACCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCAGCTATCAAATGTAATGGAAGGGAGGCAGTGACTAACTTTGAACCTAGTACATATGAAGGGGAAATGAACCCTGAGGCCGTCGATGAAGGTGGTAGTCACAATCTTGACCTCAATTTGGGCATAGCGACCACTCCATTATATGGCAATGGTCCCAAAGAAAACAGGGGGCATCTTCAGTTCCAACGTGGTCCTTACAACATGCATGTCGGAAGAATTTCAAGGATGGAGAGCAACTTTGATTCAGAAATCGGTGATCCGTCTTTCAAAAGGCTTGTAGTAACTGAAGAGCGTCCTTCTGCGTGGAATGGCATGTGTCCTAGCTTCTTTCCCAGTGAGGAAAGAGCAGAGAGAATCAGTTTAGGTCCCTCACAAGGACTCTCTAACTGGGCGTGGCAGACGCATGGCACTGCAACCCCAGTACCAGCGTTCTTTACTGCAGCATCATCAGGATTCCCGGTCTCCGCTACCTTCCCATCGAATTCGGTTTTTCCAACTAAATCTACAAACTCAACTCCACGCGATCCGTGTTTTACAGTATCCGGTGCAGCTGGCGCCAACACATCTCAATACTATTACCAGATTAAGTCCCCTCGGCCTGAGGCACCCCCCTA 1490 0.4906 MLDLNLNADSNDSTQNDESFMYLDKFPEASGNQRAESGTSNSSVVNADWSSNGGGDEDSCSTRTGDVYTFNFDILKVDGGNDDSTKELFPVNGARGVDGESGLWQGQSSSSFPSSKSRMDLSFDNPGGDREMTMVQLQQQPQQPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLTDYEEDLKQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGEMNPEAVDEGGSHNLDLNLGIATTPLYGNGPKENRGHLQFQRGPYNMHVGRISRMESNFDSEIGDPSFKRLVVTEERPSAWNGMCPSFFPSEERAERISLGPSQGLSNWAWQTHGTATPVPAFFTAASSGFPVSATFPSNSVFPTKSTNSTPRDPCFTVSGAAGANTSQYYYQIKSPRPEAPP 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02450 496 PRINTS Ethylene responsive element binding protein signature 289 309 IPR001471 GO:0003700|GO:0006355
Bva07g02450 496 PRINTS Ethylene responsive element binding protein signature 251 262 IPR001471 GO:0003700|GO:0006355
Bva07g02450 496 Pfam AP2 domain 158 206 IPR001471 GO:0003700|GO:0006355
Bva07g02450 496 Pfam AP2 domain 249 299 IPR001471 GO:0003700|GO:0006355
Bva07g02450 496 MobiDBLite consensus disorder prediction 1 20 - -
Bva07g02450 496 MobiDBLite consensus disorder prediction 81 159 - -
Bva07g02450 496 MobiDBLite consensus disorder prediction 32 60 - -
Bva07g02450 496 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 1 464 - -
Bva07g02450 496 SMART rav1_2 250 313 IPR001471 GO:0003700|GO:0006355
Bva07g02450 496 SMART rav1_2 158 220 IPR001471 GO:0003700|GO:0006355
Bva07g02450 496 MobiDBLite consensus disorder prediction 1 60 - -
Bva07g02450 496 ProSiteProfiles AP2/ERF domain profile. 250 307 IPR001471 GO:0003700|GO:0006355
Bva07g02450 496 Gene3D AP2/ERF domain 157 216 IPR036955 GO:0003700|GO:0006355
Bva07g02450 496 Gene3D AP2/ERF domain 249 308 IPR036955 GO:0003700|GO:0006355
Bva07g02450 496 ProSiteProfiles AP2/ERF domain profile. 158 214 IPR001471 GO:0003700|GO:0006355
Bva07g02450 496 SUPERFAMILY DNA-binding domain 249 308 IPR016177 GO:0003677
Bva07g02450 496 MobiDBLite consensus disorder prediction 132 147 - -
Bva07g02450 496 MobiDBLite consensus disorder prediction 102 121 - -
Bva07g02450 496 CDD AP2 249 309 IPR001471 GO:0003700|GO:0006355
Bva07g02450 496 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 464 - -
Bva07g02450 496 SUPERFAMILY DNA-binding domain 157 215 IPR016177 GO:0003677
Bva07g02450 496 CDD AP2 158 213 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02450 Bva-Chr7 19757279 19761287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02450 140 333 AP2-EREBP Transcription Factor Family AT4G36920 83.756 1.01e-100 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bva07g02450 AP2 3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02450 K09284 - gmx:100777102 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00193 09 964393 968476 Bva07g02450 07 19757279 19761287 BWGD
Bva07g02450 07 19757279 19761287 Bva07g02450 07 19757279 19761287 ECH
Bva09g00193 09 964393 968476 Bva07g02450 07 19757279 19761287 ECH