Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02437 ATGGAGTGCAGTGACTCAAACACTAGCTCTGCTTCCCCTCCTCTTTCTCAGTCTCCTACTTCATCGTCCTCTCCTTCTCCAGTTCCACAAGTTGTGGCGAGTCCTTGTGCTGCGTGCAAGATTTTAAGGCGCAGATGTGCTGAAAAATGTGTGTTGGCACCTTACTTCCCTCCCACCGAGCCTGTCAAGTTCACCATTGCTCACCGCGTCTTCGGCGCCAGCAACATCATCAAGTTCTTGcagGAACTTCCAGAAGCTCAAAGAGCTGATGCAGTGAGCAGCATGGTTTACGAGGCCAGTGCAAGAATCAGAGACCCAGTTTATGGTTGCGCGGGTGCGATTTGTCAGCTCCAAAAGCAAGTCAATGAGCTGCAAGCACAATTAGCCAAGGCACAAGCAGAGCTTGTAAACATGCAATTGCAGCAAGCCAATCTTGTGGCTCTGATTTGCATGGAAATGTCAGAGACTCCACAGGAATCATCACCACAACAATCAGTGGACGATTTCATTTCAAGTCCTCCCCATAGCAGCGGTGGCTATCAGAGCAGCATCAACTTCtatgaagaaaacaatagCCTAAACTCCATGTTGGGGGAGCCTCTTTGGACATG 611 0.4828 MECSDSNTSSASPPLSQSPTSSSSPSPVPQVVASPCAACKILRRRCAEKCVLAPYFPPTEPVKFTIAHRVFGASNIIKFLQELPEAQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAELVNMQLQQANLVALICMEMSETPQESSPQQSVDDFISSPPHSSGGYQSSINFYEENNSLNSMLGEPLWT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02437 203 MobiDBLite consensus disorder prediction 1 30 - -
Bva07g02437 203 ProSiteProfiles LOB domain profile. 34 135 IPR004883 -
Bva07g02437 203 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 18 195 - -
Bva07g02437 203 Coils Coil 114 141 - -
Bva07g02437 203 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 18 195 - -
Bva07g02437 203 Pfam Lateral organ boundaries (LOB) domain 35 132 IPR004883 -
Bva07g02437 203 MobiDBLite consensus disorder prediction 157 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02437 Bva-Chr7 19679145 19680758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02437 30 203 AS2 family AT1G07900 63.636 1.03e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva07g02437 LOB 5.1e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00209 09 1061769 1063115 Bva07g02437 07 19679145 19680758 BWGD
Bva07g02437 07 19679145 19680758 Bva07g02437 07 19679145 19680758 ECH