Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02431 ATGGACACAAACCACCCCAGCATGGCTTCTGCAGCTGATACGCAGAGAACTCTGTACCCATATGTAACCGGAACCTCTGTAGTCGCTATCAAATACAAAGATGGGATTCTTATGGCTGCTGATATGGGAGGATCATATGGGTCTACCCTGCGATACAAGAGTGTTGAACGTTTGAAGCCCATCGGAAAACATTCTCTTCTAGGTGCAAGCGGGGAAATAAGCGATTTTCAGGAGATTCTACGCTACCTTGATGAGCTCATCCTTTATGACAACATGTGGGATGATGGGAATTCTCTAGGTCCTAAGGAGAAGTACCTTGGCATGGTTAACATGATTGGTATTAACTTTGAAGACGACCATGTTGTAACTGGACTTGGAAATCATCTTGCAAGGCCAATTCTCCGCAGTGAGTGGCATGAAAATTTGACCTTTGAAGAAGGTGTCAAGTTGCTGGAAAAATGCATGCGTGTACTTCTATATCGTGATAGGTCTGCCATCAACAAGATTCagATAGCTAAAATTACTGAAGAAGGTGCTGCTGTTTTCTCGCCATTCTCATTGAAAACATTCTGGGGTTTCTCTGCTTTCCAGAATCCGACAGTGGGTGCTGAAGGTTCATGCTTATTGAGAAAGAAGGCAGCCACAATTTTTGTTCCCCTTCACTTTTCGGGTTTCTGTCATTGCTCTGCGTCTAAGATGGGTAAAGAGAAGGTTCACATCAACATTGTCGTCATTGGACATGTCGACTCCGGCAAGTCTACTACTACTGGTCATCTGATCTACAAGCTGGGTGGTATTGACAAGCGTGTGATTGAAAGGTTCGAGAAGGAGGCTGCTGAGATGAACAAGCGTTCATTCAAGTATGCATGGGTGTTGGACAAACTCAAGGCAGAGCGTGAACGTGGAATTACCATTGATATTGCCTtgtggaagtttgagacgaccAAATATTACTGCACGGTCATTGATGCCCCTGGTCACCGTGATTTTATCAAGAATATGATCACAGGAACCAGTCAGGCTGACTGTGCGGTTCTCATTATTGACTCTACCACTGGTGGTTTTGAGGCTGGTATCTCCAAGGATGGCCAGACCCGTGAACATGCTCTTCTTGCCTTCACTCTTGGAGTGAAACAAATGATCTGCTGTTGCAACAAAATGGACGCTACTACACCAAAGTACTCTAAGGCTAGGTATGATGAAATTGTAAAGGAAGTTTCTTCGTATTTGAAGAAGGTCGGGTACAACCCTGAGAAGGTTCCTTTTGTTCCGATCTCTGGATTTGAGGGCGACAACATGATTGAGAGATCAACCAACCTTGACTGGTATAAGGGTCCCACCCTTCTTGAAGCCTTGGACCAGATTAATGAGCCTAAGAGGCCCTCTGACAAACCCCTTCGTCTTCCACTTCAAGATGTTTACAAGATTGGTGGCATTGGAACTGTTCCCGTTGGTCGTGTTGAGACTGGTGTTCTCAAACCTGGTATGGTTGTTACCTTTGCTCCCTCTGGCCTCACAACTGAGGTTAAGTCTGTGGAGATGCACCATGAAGCTCTTCAGGAGGCTGTTCCTGGTGATAATGTTGGATTTAACGTAAAGAATGTTGCTGTTAAGGATCTGAAGCGTGGTTATGTTGCGTCCAATTCCAAGGACGATCCTGCCAAGGAGGCAGCTAACTTCACTTCTCAGGTTATCATCATGAACCACCCTGGTCAGATTGGAAATGGTTATGCTCCAGTGCTCGACTGCCATACTTGTCACATTGCTGTGAAGTTTGCTGAAATCTTAACTAAGATCGATAGGCGTTCGGGTAAAGAGCTTGAGAAAGAGCCCAAGTTCTTGAAGAATGGTGATGCCGGGTTTGTTAAGATGATTCCCACCAAGCCAATGGTTGTTGAGACTTTCTCCGCATACCCCCCACTTGGTAGGTTTGCAGTGAGGGACATGCGACAGACTGTGGCTGTTGGTGTCATCAAGAGTGTGGAAAAGAAGGACGCATCTGCCAAGGTGACCAAGTCCGCCGCAAAGAAGGGTGCTAAGTG 2042 0.4535 MDTNHPSMASAADTQRTLYPYVTGTSVVAIKYKDGILMAADMGGSYGSTLRYKSVERLKPIGKHSLLGASGEISDFQEILRYLDELILYDNMWDDGNSLGPKEKYLGMVNMIGINFEDDHVVTGLGNHLARPILRSEWHENLTFEEGVKLLEKCMRVLLYRDRSAINKIQIAKITEEGAAVFSPFSLKTFWGFSAFQNPTVGAEGSCLLRKKAATIFVPLHFSGFCHCSASKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPSGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQTVAVGVIKSVEKKDASAKVTKSAAKKGAK 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02431 680 CDD EF1_alpha_II 462 552 - -
Bva07g02431 680 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 11 192 IPR029055 -
Bva07g02431 680 TIGRFAM EF-1_alpha: translation elongation factor EF-1, subunit alpha 233 665 IPR004539 GO:0003746|GO:0005525|GO:0006414
Bva07g02431 680 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 92 203 IPR029055 -
Bva07g02431 680 CDD EF1_alpha 241 459 - -
Bva07g02431 680 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 237 462 IPR000795 GO:0003924|GO:0005525
Bva07g02431 680 Gene3D - 228 460 IPR027417 -
Bva07g02431 680 SUPERFAMILY Translation proteins 458 553 IPR009000 -
Bva07g02431 680 PANTHER ELONGATION FACTOR 1-ALPHA 1 227 677 - -
Bva07g02431 680 Pfam Elongation factor Tu C-terminal domain 554 661 IPR004160 -
Bva07g02431 680 Pfam Elongation factor Tu domain 2 480 545 IPR004161 GO:0005525
Bva07g02431 680 Pfam Elongation factor Tu GTP binding domain 238 454 IPR000795 GO:0003924|GO:0005525
Bva07g02431 680 ProSitePatterns Proteasome beta-type subunits signature. 28 75 IPR016050 GO:0005839|GO:0051603
Bva07g02431 680 Pfam Proteasome subunit 23 84 IPR001353 GO:0005839|GO:0051603
Bva07g02431 680 Pfam Proteasome subunit 104 174 IPR001353 GO:0005839|GO:0051603
Bva07g02431 680 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 558 661 IPR009001 -
Bva07g02431 680 Gene3D Translation factors 461 548 - -
Bva07g02431 680 CDD EF1_alpha_III 555 658 - -
Bva07g02431 680 Gene3D Translation factors 555 662 - -
Bva07g02431 680 PANTHER TRANSLATION FACTOR 227 677 - -
Bva07g02431 680 Hamap Elongation factor Tu [tuf]. 234 664 IPR004539 GO:0003746|GO:0005525|GO:0006414
Bva07g02431 680 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 91 IPR029055 -
Bva07g02431 680 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 293 308 IPR031157 -
Bva07g02431 680 PRINTS GTP-binding elongation factor signature 336 347 IPR000795 GO:0003924|GO:0005525
Bva07g02431 680 PRINTS GTP-binding elongation factor signature 300 308 IPR000795 GO:0003924|GO:0005525
Bva07g02431 680 PRINTS GTP-binding elongation factor signature 320 330 IPR000795 GO:0003924|GO:0005525
Bva07g02431 680 PRINTS GTP-binding elongation factor signature 380 389 IPR000795 GO:0003924|GO:0005525
Bva07g02431 680 PRINTS GTP-binding elongation factor signature 241 254 IPR000795 GO:0003924|GO:0005525
Bva07g02431 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 235 481 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02431 Bva-Chr7 19638136 19644532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02431 233 671 Eukaryotic Initiation Factors Gene Family AT5G60390 95.227 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02431 K03231 - dzi:111297638 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02431 07 19638136 19644532 Bva07g02431 07 19638136 19644532 ECH
Bva09g00219 09 1104611 1112124 Bva07g02431 07 19638136 19644532 ECH