Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02427 ATGGAAATTGATCTGAACCATGCAGTGAGTGAGGTTGAGAATAATACATTATGTAATGGGGAGTGTGAGAAGGGCGCCTGCGGTTGCTGTTTGCGCTCTTCGACTTCGGGTTCGTCTTCGGCTCATGTGTCTTCTTCTTACTTGGAGCTTTGGCATGCTTGTGCTGGCCCTCTCACCTCCCTGCCTAAGAAAGGAAATGCGGTCGTCTATTTTCCACAAGGTCACTTAGAACAGGTGGCCTCTTTCTCTCCTATCTCACCCTTGGACACACCCACCTATGATCTTCAACCACAGATCTTTTGCAAGGTTGTCAATGTTCAGCTACTTGCCAATAAGGAGAATGATGAGGTTTATACGCAGGTTACCTTGTTTCCCCAGGCAGAGTTGGCTGGGTTGCATTCAGAGGGGAAGGAGCTTGAGGAATTGGGAATTGACGAAGAGGGAAATGGAGGATCACCTACAAAATCAACTCCTCACATGTTCTGTAAAACGCTTACGGCTTCTGATACCAGCACTCATGGGGGTTTCTCTGTTCCTCGTAGAGCTGCCGAAGACTGTTTTCCTCCTCTGGATTATAAGCAGCAGAGACCCTCTCAAGAACTTGTGGCAAAGGACCTGCATGGAGTGGAGTGGAAATTTCGCCATATCTATAGAGGTCAGCCGAGGCGACATCTGCTAACTACTGGCTGGAGTATTTTTGTTAGTCAGAAGAATCTTGTTTCTGGCGATGCGGTGCTCTTTTTAagGGGTGAAAATGGAGAATTGAGATTGGGAATCAGAAGAGCTGTACGACCTAGAAATGGTCTTCCTGAATCAATTCTTGGAAACCAGAATTGTTATcctagttttctttctcttgtggcTAATGCTATATCCACCAAAAGTATGTTTCATGTTTTCTACAGTCCAAGAGCGAGTCATGCAGAGTTTGTTGTGCCGTACCAGAAATATGTCAAAAGCATAAAGAATCCAGTGACCATTGGGACGAGATTCAAAATGAAGTTTGAGATGGATGAAGCTCCCGAAAGAAGGTGCACTGCTGGTATAGTGACTGGAATCGGTGACTTGGATCCCTATCGATGGCCTAAATCAAAATGGAGGTGCTTGATGGTGAGATGGGATGATGATATTTCTAGTAATCATCAAGAACGAGTTTGTCCATGGGAGATTGACCCTTGTGTTTCTTTCCCTCCATTGAGCATTCAGTCTTCCCCGAGACTGAAGAAATTGCGGACAGGTCTGCAGGGTGCCTCACCCAGCCACTTCGTCGGAGGCGGTGGGTTTATGGACTCTGAGGAGAAGTCTATGAGACCACCCAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTGTGTCCCTCTATTATGGACGTGACACAATAACCAACCGGTCAGATTGCCATCAAAATATTGCATTAACTGGCATAAGACAGGCTAGAGCTCAGACTCACCCTTCTAGTTATGCAGGCTTAGGCTTAGGCTTAGCGGAAACTAATAGATTCCGGAGGGTCTTGCAAGGTCAAGAAATATGTCCTTTGACAGTCACAGGAAAGGTTGATTTTAACCTTGGTGCTTGTCCATGGGGTAAAGATAAACCCAATCTGACTTGTAAAACTTTCAACATGCATCATGCACCCAAACCCAACTTTCACCCTTTAGGACCTCATGTCCTTCAAACTGCATATTTCCCTTATGGTGACATAAACATTCCCAAAGCTAGTCAAGGCAACACCTTTTGCTCTAAACCAAGTAATTTCCAGAGGGAGAATGTGCCATTTAGCACATGTCCCACTCAGAAAAAAGAGGATATTCCAAGTGAGCAGAAGCTGCAGAACAATATCTCTGCTGCTACTTTGGGGGGAAATATAATGATTTcgaatgaagaaaatttcaaaggtGAGGTAAGCGGCAATGCCTGTAAACTATTTGGGTTTCCCTTGTCTGGGGAAAGCACAAGTCAGAATTCTGCAGCTAAAAGGAGTTGCACAAAGgttCACAAGCAAGGCAGCTTAGTTGGAAGAGCCATCGACCTCTCGAGACTGGGCAGCTACAATGAGCTGTTGGGTGAACTAGAGCGACTATTTGGCATGGAAGGCCTTCTGAGAGATCCTGATAAGGGATGGAGGATCCTCTACACCGATAGGGAGAACGACATCATGGTTGTAGGGGATGACCCTTGGCATGAATTCTGCGACGTGGTGTCCAAGATCCATATATATACCCAAGAAGAAGTGGAGAAGATGACGATTGGGATGATCAATGATGATACGCAGAGCAGTTTGGAGCAGGAACGACCGATAATGGAAGCTTCAAAGTCTTCTTCGGTGGGGCAACCAGATTCTTCTCCAACAGTAGTCAGGGTCTA 2363 0.4486 MEIDLNHAVSEVENNTLCNGECEKGACGCCLRSSTSGSSSAHVSSSYLELWHACAGPLTSLPKKGNAVVYFPQGHLEQVASFSPISPLDTPTYDLQPQIFCKVVNVQLLANKENDEVYTQVTLFPQAELAGLHSEGKELEELGIDEEGNGGSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNGLPESILGNQNCYPSFLSLVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNPVTIGTRFKMKFEMDEAPERRCTAGIVTGIGDLDPYRWPKSKWRCLMVRWDDDISSNHQERVCPWEIDPCVSFPPLSIQSSPRLKKLRTGLQGASPSHFVGGGGFMDSEEKSMRPPKVLQGQENTGFVSLYYGRDTITNRSDCHQNIALTGIRQARAQTHPSSYAGLGLGLAETNRFRRVLQGQEICPLTVTGKVDFNLGACPWGKDKPNLTCKTFNMHHAPKPNFHPLGPHVLQTAYFPYGDINIPKASQGNTFCSKPSNFQRENVPFSTCPTQKKEDIPSEQKLQNNISAATLGGNIMISNEENFKGEVSGNACKLFGFPLSGESTSQNSAAKRSCTKVHKQGSLVGRAIDLSRLGSYNELLGELERLFGMEGLLRDPDKGWRILYTDRENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKMTIGMINDDTQSSLEQERPIMEASKSSSVGQPDSSPTVVRV 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02427 787 Pfam Auxin response factor 287 369 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bva07g02427 787 ProSiteProfiles B3 DNA-binding domain profile. 161 263 IPR003340 GO:0003677
Bva07g02427 787 SUPERFAMILY CAD & PB1 domains 652 738 - -
Bva07g02427 787 CDD B3_DNA 159 261 IPR003340 GO:0003677
Bva07g02427 787 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 775 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bva07g02427 787 SMART B3_2 161 263 IPR003340 GO:0003677
Bva07g02427 787 Pfam AUX/IAA family 652 743 IPR033389 -
Bva07g02427 787 ProSiteProfiles PB1 domain profile. 659 743 IPR000270 GO:0005515
Bva07g02427 787 MobiDBLite consensus disorder prediction 759 787 - -
Bva07g02427 787 Gene3D - 159 263 IPR015300 -
Bva07g02427 787 SUPERFAMILY DNA-binding pseudobarrel domain 153 272 IPR015300 -
Bva07g02427 787 Gene3D - 654 748 - -
Bva07g02427 787 PANTHER AUXIN RESPONSE FACTOR 9 775 - -
Bva07g02427 787 Pfam B3 DNA binding domain 161 262 IPR003340 GO:0003677
Bva07g02427 787 Gene3D - 325 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02427 Bva-Chr7 19611463 19616440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02427 43 787 B3 DNA Binding Superfamily AT5G60450 60.550 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bva07g02427 AUX_IAA 1.1e-06 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02427 - - gmx:100812909 1195.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00221 09 1124976 1129454 Bva07g02427 07 19611463 19616440 BWGD
Bva07g02427 07 19611463 19616440 Bva07g02427 07 19611463 19616440 ECH