Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02424 ATGGATGTGGCACGCTACGGTGAGCATAATCGAATTATCCTTCGAGTCGATTCGATATGCCAGAAATATGATAAGTATGATATTGATAAGCAGCGGGAGCTCAATGCCTACGATGCCTTCGCTCGTCTCTATGCCACTGTTGAGAAGAACATTCAATCCTCTCTCAGTAAATCTGAGATGGCTTCTAAGGAGAAGAATAGAGCAGTTGCTGTGGCGTTGAATGCGGAAGACTGTCGGACTAAAGGTCTACTCATGGACGAAGTTCCTAAACTGCGCAAACTGGTGCAAAGGAAGGTGAATCCATTTGGtgacatttatttctttaatcatttaaatggCTTCATTTCCAGGTTAAGGGTCTCACGAATGAAGACAGCCATTCGTAATGAGCTGGTTCTATCGTTAGTCGAGAGGATCGAAGCAATACCAGATGGTAGTGTGGCTGCAGCTAATCAAACAGAAGGAACAGCTATCAGGTCTCATCAGCAAATCAAGTTTGACGCAACAGATGGAGATCTTGATAGCGAACTTTTCTTCAAACTGAAGAATCAAGATGAAGGACTTGATATCATATCAGACGGACTggatactttaaaaaatttggccCAAGATATGAATGAGGAATTAGACCGGCAAGTTCCATTAATGAATGAAATTGACGCAAAGGTGGATCGGGCAACATCTgatcttaaaaaatacta 701 0.3951 MDVARYGEHNRIILRVDSICQKYDKYDIDKQRELNAYDAFARLYATVEKNIQSSLSKSEMASKEKNRAVAVALNAEDCRTKGLLMDEVPKLRKLVQRKVNPFGDIYFFNHLNGFISRLRVSRMKTAIRNELVLSLVERIEAIPDGSVAAANQTEGTAIRSHQQIKFDATDGDLDSELFFKLKNQDEGLDIISDGLDTLKNLAQDMNEELDRQVPLMNEIDAKVDRATSDLKKY 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02424 233 CDD SNARE_Qc 181 232 - -
Bva07g02424 233 PANTHER SYNTAXIN 120 232 IPR045242 -
Bva07g02424 233 PANTHER SYNTAXIN-73 120 232 - -
Bva07g02424 233 SMART tSNARE_6 173 233 IPR000727 -
Bva07g02424 233 PANTHER SYNTAXIN-73 11 100 - -
Bva07g02424 233 PANTHER SYNTAXIN 11 100 IPR045242 -
Bva07g02424 233 SUPERFAMILY SNARE fusion complex 180 231 - -
Bva07g02424 233 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 178 233 IPR000727 -
Bva07g02424 233 ProSitePatterns Syntaxin / epimorphin family signature. 184 223 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bva07g02424 233 Gene3D - 181 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02424 Bva-Chr7 19596474 19598962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02424 12 231 SNARE and Associated Proteins AT3G09740 49.791 2.82e-66 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02424 K08506 - gmx:100777251 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02424 07 19596474 19598962 Bva07g02424 07 19596474 19598962 ECH