Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02414 atgGGTAACATCGGAAGCAGTAGAGGGGGTCGCCGTAGGCGGCGGAGTCATCCCCAACCGGAAATTACTGCAAATGCTAACGGCTTCGTTTATGTTTATACCGCTGCTGCAGTCCATCCTTCTCAAAACCCAAATTCGTCGATGGTGCTGGGTTCAAATTCACAGCCTTCTTCTGGTGCTGGAGTCAATCCACCACCCGTTACTGCCAATTCTGTTCATGGACCCGATTCCGCTCCTTCCGAGTCCTATGTAGAGCATCAGAAAGCGGAAACAATCCGGAACCATGTAAACATTAAGAAGGAGACGCTGCGAATTGAACCCGATGAAGATAACCCCGGGAATTTCCTTGTAGCTTTCTCCTTTGATGCTACTGCACCTGGAAGCATTACGGTTATGTTTTTTGCGAAGGAAACTATAGACGGTAAGCTGATAGCAGTAAAGGAAATCATGCTAAAACAAGTCTCAATGCCATTCCAACAAGGTCTCTGTCAGAAGTTTAAACAAACTTCTGGAACTGGCATTGGTTTCTCATTGTTGGAGGATACAGAACTTAAAAAAGAAGGGGACATGGAAGTTTATCCTCTCGTGTTGAAGGCTGAAACTGATGGAAACCCATTACATGATTGTCAAGTCACTCTGGCAAGTTtcgagaagagagagaaaggcgAGTATGAGGTCCAGGTAATGAAGCAGATTCTCTGGGTGAAAGGTCAGAAATATGAGCTGCAGGAGATATATGGAATTGGGAATACTGGTGATGGTGATATCGATGGCAATGAATCTGGAAGAGAATGTGTTATTTGCTTATCAGAACCACGCGACATAACTGTCCTCCCTTGCCGACACATGTGCATGTGCAGTGGCTGTGCGAAGCTTCTGAGGTCCCACACAGACAGCTGCCCTATATGTCGACACCCAGTTGAGCGACTCATGGAAATCAGAATGAGCGATGGACCTGGTGATCCATG 968 0.4525 MGNIGSSRGGRRRRRSHPQPEITANANGFVYVYTAAAVHPSQNPNSSMVLGSNSQPSSGAGVNPPPVTANSVHGPDSAPSESYVEHQKAETIRNHVNIKKETLRIEPDEDNPGNFLVAFSFDATAPGSITVMFFAKETIDGKLIAVKEIMLKQVSMPFQQGLCQKFKQTSGTGIGFSLLEDTELKKEGDMEVYPLVLKAETDGNPLHDCQVTLASFEKREKGEYEVQVMKQILWVKGQKYELQEIYGIGNTGDGDIDGNESGRECVICLSEPRDITVLPCRHMCMCSGCAKLLRSHTDSCPICRHPVERLMEIRMSDGPGDP 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02414 322 MobiDBLite consensus disorder prediction 44 65 - -
Bva07g02414 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 252 315 IPR013083 -
Bva07g02414 322 SUPERFAMILY RING/U-box 264 310 - -
Bva07g02414 322 MobiDBLite consensus disorder prediction 44 87 - -
Bva07g02414 322 PANTHER - 1 320 - -
Bva07g02414 322 PANTHER MAHOGUNIN 1 320 IPR045194 GO:0061630
Bva07g02414 322 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 264 304 IPR045195 -
Bva07g02414 322 PIRSF SBP1_RNase_bind 243 316 IPR017066 -
Bva07g02414 322 PIRSF SBP1_RNase_bind 34 106 IPR017066 -
Bva07g02414 322 ProSiteProfiles Zinc finger RING-type profile. 265 304 IPR001841 -
Bva07g02414 322 SMART ring_2 265 303 IPR001841 -
Bva07g02414 322 Pfam Zinc finger, C3HC4 type (RING finger) 263 309 - -
Bva07g02414 322 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02414 Bva-Chr7 19542973 19545765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02414 83 284 C3H Transcription Factor Family AT3G09770 58.065 7.34e-79 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02414 - - csin:114321653 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02414 07 19542973 19545765 Bva07g02414 07 19542973 19545765 ECH