Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02411 ATGAGTACTGAGGAAAAACCTGTGGGTGACTGCCATGACACGGCTTCCTGCAGAAGAACAGTTTCTCTTGCAGTCCAAAAGATTGATATTCCAATGGGAGTAGCTGAAGAATCCAGACATGTTCGTCACGGGAAGCGACCAAATCTTGTCCTGGAAATACCTCCACGAACAACAGAAGAGTCTTCTCAGGATTTTGTTAAAATCAATATGCCTGTGACACCAAGTCCCACTCCTACTCCCACTCCAAAGAGAGTCAATTTTCTTGTGTCTTCTCGCTCTGTTGATCCTCCCAATAATAATGCTCCGGTGTCTTCCTTGTCAAGAGCCAAATCTTCGATCAGAAATTTCTTACCCAAATTGAGCTTCAGGTACAGGTCATCAGATTCTGAAAATGGTCCTACTGCAGCTCTGGAAAGTTCCTCTTCTGGCCTTCAAGAAAAGCCTTCCATCTCAAGATCATTATCCCTTACTAAGATATTTACTCCTAAGATTAAGAGAACATCATCATTGCCAGTACATCAAATTCCAAACTTAAACCCAGAACCTGCTCATGGAGGAGGTGTTCAGAGAAGAGAGTCCCAAGGGCAGATAGCACGCTCTCTTTCAGTGCCTGTCATCAACAATGAAAAAAGCTTGAGGAGAATGGATTCATTTTTCCGCGTTATTCCTTCCACCCCTCGAGTGAAGGAAGGAAATGAAACGTTAGCCAAATCCCCAATAGCGGATTCTGAAAACGACGATTCTGATGCTGAAGATATAGCTGAAGAAGAGGCTGTGTGTAGAATTTGCTTAGTTGAGCTATGTGAAGGAGGCGAGACCTTCAAACTGGAATGCAACTGTAAAGGTGAACTTGCTCTGGCTCACCAAGAATGTGCAATTAAATGGTTCAGCATCAAAGGTAACAAGATCTGTGATGTGTGCAAGGAGGAGGTTCGAAACCTACCAGTCACTCTTCTACGGATCCAAAGCGTCCTCACTGGAAATATTGGATCAAGTATGTTTCAGCAGGCAGATGTAAATGGATACAGGGTTTGGCAGGAGGTGCCGGTGCTTGTCATTGTCAGCATGCTTGCCTATTTCTGTTTCCTTGAGCAGCTATTGGTTGGAAAAATGGGTACTGGTGCAATTGCCATATCTCTTCCATTTTCCTGTGTACTGGGTCTACTCTCCTCCATGACATCATCAACCATGGTGAAGAGCAGGTTTATCTGGATTTATGCATCTGTCCAGTTTGCCCTGGTGGTTCTCTTTGCACATTTGTTTTACTCCTTGGTACATGTGCAAGCAGTTGTGTCGATCCTTCTTGCGACATTTGCTGGGTTTGGTGTGGTCATGAGTGGGAGTTCTATTCTTGTTGAGTTTTTTAGATGGAGAAGAAGATGGCAGGTGTTGTCAGATCAGCAGCATGGTTCTCAGGTGATGACACGAGCAGGACATAACCCTGTAACTGTAAATATAACGCATGCAGGTCCTCCCAACCAAACCTA 1487 0.4438 MSTEEKPVGDCHDTASCRRTVSLAVQKIDIPMGVAEESRHVRHGKRPNLVLEIPPRTTEESSQDFVKINMPVTPSPTPTPTPKRVNFLVSSRSVDPPNNNAPVSSLSRAKSSIRNFLPKLSFRYRSSDSENGPTAALESSSSGLQEKPSISRSLSLTKIFTPKIKRTSSLPVHQIPNLNPEPAHGGGVQRRESQGQIARSLSVPVINNEKSLRRMDSFFRVIPSTPRVKEGNETLAKSPIADSENDDSDAEDIAEEEAVCRICLVELCEGGETFKLECNCKGELALAHQECAIKWFSIKGNKICDVCKEEVRNLPVTLLRIQSVLTGNIGSSMFQQADVNGYRVWQEVPVLVIVSMLAYFCFLEQLLVGKMGTGAIAISLPFSCVLGLLSSMTSSTMVKSRFIWIYASVQFALVVLFAHLFYSLVHVQAVVSILLATFAGFGVVMSGSSILVEFFRWRRRWQVLSDQQHGSQVMTRAGHNPVTVNITHAGPPNQT 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02411 495 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 39 479 - -
Bva07g02411 495 CDD RING_CH-C4HC3_MARCH 260 308 - -
Bva07g02411 495 MobiDBLite consensus disorder prediction 124 150 - -
Bva07g02411 495 MobiDBLite consensus disorder prediction 230 249 - -
Bva07g02411 495 PANTHER OS02G0165000 PROTEIN 39 479 - -
Bva07g02411 495 SUPERFAMILY RING/U-box 256 311 - -
Bva07g02411 495 SMART ringv_2 259 308 IPR011016 GO:0008270
Bva07g02411 495 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 244 315 IPR013083 -
Bva07g02411 495 Pfam RING-variant domain 260 307 IPR011016 GO:0008270
Bva07g02411 495 ProSiteProfiles Zinc finger RING-CH-type profile. 252 314 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02411 Bva-Chr7 19532333 19536209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02411 177 314 C3H Transcription Factor Family AT2G37950 31.690 2.97e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02411 - - gmx:100815566 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00238 09 1212254 1217404 Bva07g02411 07 19532333 19536209 BWGD
Bva07g02411 07 19532333 19536209 Bva07g02411 07 19532333 19536209 ECH