Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02406 ATGTTAACAATGCGATTGCTCTGGTGGCAGCACTTGCCATTGCTTATACTGATACAACTTCTATGGCCCAATAGTTGGAGCTACACATTTTTTGGTGAAGCTTTGTTCAATTTCAAGGGTTCGTTTGGTGGCCAACGGCAATTTAGATGTAGCAATGCCAAATACCCATGCCAAAGGCGATGGCCTTGTCTTAACTGCTATCAACTAAAAGATCCAGGTGCTTTTTCTCTGGGGATAGCAGCAAAAATAGAAGGGAATAATGAGGTTCCAACACTTACGCCTTTGCAAGAAAATCAAGATAACAGACCAACAAGTAAAAAGGTTGGTGCCTCAGTTGGTGGGGTTGTTGCTGCCTTAATCGTGATTGTTATTGTGGTGATTGTCTATATTTGCTTGATGCGTGTCAAAAGATTTATAAGGCAGACATCTGAGACTGCATCTTCAGTGCCATCTCCAGTTGAATTGGGAAGAGGAAACAATTGTGCTCCCTCTTCATATGATACACACAAGATAAGACAAATAACAATATTGGAACTAGAACAAGCCACGCGAAATTTCAGTGAAAGCAATATCATAGGCGGTGgtacatttggtttggtttacaAAGGCTTGCTTCAAGATGGATCCATTGTCGCCATAAAAAGGCGCTTGTTTGCTCTGTCTCCAGATTTCACCCATCAGGTGAAGCACATAGCTCGCATCCACCATCTCCATCTTGTAACGCTTTTGGGGTATTATGAAGATAGCCATCAACAATTACTTGTGTATGAATATCTCCCTAATGGAAATGTAGGGAATCACCTATATGATAATGATGGTTTACCTATTGGACAGTTAGACATCCGGCGAAGATTATCTATTGCCTTGGGTGCATCCAAAGGACTAGAGCATCTACACAGTCTGAATCCTCCTTTATTTCACACAGATTTTCGAACTAGCAATGTTCTCCTGGATGAAAAATTTACTCCAAaagtttctgattttggattttacaatttgaaaaaCACCGTCGAACAGGCTGGATCTTCTTCAAACATAGACTGCTTCATTGACCCAGAGTTGAATTCTCCACAATACTTTACAGAGAAGAGTGATGTATATAGTTTTGGGGTCTTTTTACTTGAACTGACTTGTGGACGTGAAGCACGTTACAGAAACCAATCGAACTCTGAGGAAAATCTAGTTTTTCAGgCTAAAAATTGCAAGGACTTGGACAAGTTTCTGGATATAACACTTGGAGACCATGAAAAGCTTGCTGCTATGAAGATGATGGAGTTGGCATTGCTTTGTTTAGAAGTCAATTTTAGAAGACCATCTATGAGGCAAATTGTGGACCAGCTGGAGCGAATTCAACAAACAGAAATTGCTCCCTTGCATTCTTACACCATTGAGGAGATTGGCGTGGTCACTCTTGGGAGTGAGCTCTTCAAATG 1433 0.3971 MLTMRLLWWQHLPLLILIQLLWPNSWSYTFFGEALFNFKGSFGGQRQFRCSNAKYPCQRRWPCLNCYQLKDPGAFSLGIAAKIEGNNEVPTLTPLQENQDNRPTSKKVGASVGGVVAALIVIVIVVIVYICLMRVKRFIRQTSETASSVPSPVELGRGNNCAPSSYDTHKIRQITILELEQATRNFSESNIIGGGTFGLVYKGLLQDGSIVAIKRRLFALSPDFTHQVKHIARIHHLHLVTLLGYYEDSHQQLLVYEYLPNGNVGNHLYDNDGLPIGQLDIRRRLSIALGASKGLEHLHSLNPPLFHTDFRTSNVLLDEKFTPKVSDFGFYNLKNTVEQAGSSSNIDCFIDPELNSPQYFTEKSDVYSFGVFLLELTCGREARYRNQSNSEENLVFQAKNCKDLDKFLDITLGDHEKLAAMKMMELALLCLEVNFRRPSMRQIVDQLERIQQTEIAPLHSYTIEEIGVVTLGSELFK 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02406 477 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Bva07g02406 477 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 79 475 - -
Bva07g02406 477 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 79 475 - -
Bva07g02406 477 Pfam Protein tyrosine and serine/threonine kinase 190 447 IPR001245 GO:0004672|GO:0006468
Bva07g02406 477 Gene3D Phosphorylase Kinase; domain 1 154 258 - -
Bva07g02406 477 ProSitePatterns Tyrosine protein kinases specific active-site signature. 305 317 IPR008266 GO:0004672|GO:0006468
Bva07g02406 477 SUPERFAMILY Protein kinase-like (PK-like) 162 456 IPR011009 -
Bva07g02406 477 Gene3D Transferase(Phosphotransferase) domain 1 259 463 - -
Bva07g02406 477 ProSiteProfiles Protein kinase domain profile. 186 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02406 Bva-Chr7 19511566 19515510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02406 104 452 Receptor kinase-like Gene Family AT1G79620 34.626 1.32e-52 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Bva07g02406 PK_Tyr_Ser-Thr 1.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02406 - - gmx:100815066 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02406 07 19511566 19515510 Bva07g02406 07 19511566 19515510 ECH