Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02403 ATGGCGAAAGACGTAGAGGTTCAAGAGCGAGGTGGAGAGTACTCAGCTAAAGACTACCACGACCCACCACCAGCACCTTTGATCGATGCAGAGGAGCTCACAAAGTGGTCTTTCTACAGAGCCCTCATCGCTGAGTTCATAGCAactcttctcttcctttacGTTACTGTCTTGACTGTTATTGGATACAAACACCAGACTGACATCCCCAACGGCGAGTGCGAGGGTGTTGGAATTTTGGGTATCGCTTGGGCCTTCGGTGGCATGATTTTCATCCTTGTTTACTGCACCGCCGGTATCTCTGGTGGTCACATCAACCCGGCTGTGACATTCGGGCTGTTCCTGGGAAGAAAGGTGTCTCTAATCAGAGCTTTGCTCTACATGGTAGCACAGTGTGCTGGTGCTATCTGTGGTACTGGACTCGTCAAGGGCTTCCAGAAATCTTACTATAACAGGTATGGTGGTGGGGCCAACGAAGTCGCCACTGGCTACAACAAGGGTACTGCTTTGGGTGCCGAGATCATTGGTACCTTTGTTCTTGTCTACACTGTCTTCGCCGCCACTGATCCTAAGAGAAACGCAAGAGACTCCCATGTTCCTgtgTTAGCACCACTACCAATTGGATTCGCTGTGTTCATGGTGCACTTGGCTACCATCCCCATCACTGGTACTGGCATTAACCCAGCCAGGAGTTTTGGAGCAGCTGTGATCTACAACCAAGACAAACCCTGGGATGACCACTGGATTTTCTGGGTTGGACCATTTATTGGAGCTGCCGCAGCTGCATTCTACCACCAGTTCATTCTTAGAGCTTCAGCCATTAAAGCTCTTGGATCTTTCAGGAGCAacgctta 854 0.4859 MAKDVEVQERGGEYSAKDYHDPPPAPLIDAEELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKHQTDIPNGECEGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCAGAICGTGLVKGFQKSYYNRYGGGANEVATGYNKGTALGAEIIGTFVLVYTVFAATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNQDKPWDDHWIFWVGPFIGAAAAAFYHQFILRASAIKALGSFRSNA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02403 284 SUPERFAMILY Aquaporin-like 32 270 IPR023271 -
Bva07g02403 284 TIGRFAM MIP: MIP family channel proteins 44 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02403 284 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 284 IPR034294 -
Bva07g02403 284 ProSitePatterns MIP family signature. 104 112 IPR022357 -
Bva07g02403 284 CDD MIP 40 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02403 284 PRINTS Major intrinsic protein family signature 248 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02403 284 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02403 284 PRINTS Major intrinsic protein family signature 123 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02403 284 PRINTS Major intrinsic protein family signature 86 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02403 284 PRINTS Major intrinsic protein family signature 172 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02403 284 PRINTS Major intrinsic protein family signature 208 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02403 284 PANTHER AQUAPORIN PIP2-4-RELATED 1 284 - -
Bva07g02403 284 Pfam Major intrinsic protein 32 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02403 284 Gene3D Glycerol uptake facilitator protein. 25 284 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02403 Bva-Chr7 19502084 19503682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02403 1 284 Major Intrinsic Protein MIP AT2G37170 82.168 3.02e-173 480
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00246 09 1245376 1247055 Bva07g02403 07 19502084 19503682 BWGD
Bva07g02403 07 19502084 19503682 Bva07g02403 07 19502084 19503682 ECH
Bva09g00246 09 1245376 1247055 Bva07g02403 07 19502084 19503682 ECH
Bva04g02581 04 23076548 23078042 Bva07g02403 07 19502084 19503682 ECH
Bva13g01951 13 15735063 15736495 Bva07g02403 07 19502084 19503682 ECH