Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02396 ATGGCGATGGTTGTGGCTCAACACAGAGAAAGCAGCAGTGGGAGCATCAACAAGCACCTTGATGCTGGCAAGTATGTCCGCTACACGCCTGAGCAGGTTGAAGCGCTTGAAAGGGTTTATGCTGAGTGCCCCAAGCCCAGCTCCTTGCGAAGGCAGCAATTGATCAGAGAGTGCCCCATTCTTTCCAACATCGATCCCAAACAGATCAAAGTTTGGTTCCAGAATCgcagGTGTAGAGAGAAGCAGAGAAAAGAGGCCTCCAGGCTTCAGACTGTGAACAGGAAACTGACAGCAATGAACAAGCTATTGATGGAGGAAAACGATCGGTTGCAAAAACAGGTGTCACAACTCGTTTGTGAGAATGGATATATGCGGCAGCAACTGCAAACTGCACCAGGTGCAACCGATGCAAGTTGTGATTCGGTGGATACTACTCCTCAGCATTCTCTCAGAGATGCTAATAGTCCTGCTGGACTCTTATCAATCGCGGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACGGGGACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCCATTTCGCAAAGTTGTAGCGGAGTGGCTGCTCGAGCCTGCGGTCTTGTTAGTTTAGAGCCTACAAAGATTGCAGAGATCCTGAAAGATCGTCCATCTTGGTTTCGGGACTGTCGGAGCCTTGAAGTTTTCACAATGTTCCCTGCTGGAAATGGAGGGACAATTGAGCTTGTTTACACACAGGCATATGCTCCAACTACATTGGCTCCTGCCCGGGATTTCTGGACTCTGAGATACACTACAAGTTTAGAAAACGGCAGTCTTGTGGTCTGTCAGAGGTCACTATCTGGTTCTGGTGCTGGGCCTAATGCAGCTGCTGCTGCTCAGTTTGTGAGAGCTGAAATGCTTCCTAGTGGGTACTTGATTAGACCATGTGAAGGTGGAGGATCGATCATCCACATTGTAGACCACCTAAATCTTGAGCCATGGAGCGTGCCAGAGGTTCTGCGACCCCTTTATGAATCGTCAAAAGTGGTAGCTCAGAAAATGACTATTGCGGCTCTTCGCTATGTCAGACAAATAGCTCAAGAAACAAGCGGTGAAGTGGTATATGGTTTGGGTAGGCAGCCTGCTGTCCTGCGAACGTTCAGCCAAAGATTGAGCAGAGGCTTTAATGATGCTGTCAATGGATTCAGTGACGATGGCTGGTCTGTACTGAATTGTGATGGTGCTGAGGATGTAATTATTGCAGTTAATTCAACTAAGAATTTGAGTGCCACTTCTAATCCTGCGAGTTCCCTTACATTCGTTGGAGGAATTCTATGTGCAAAGGCTTCCATGTTGCTCCAAAATGTTCCGGCTGCAGTTCTGGTTCGCTTTTTGAGGGAGCACCGTTCAGAGTGGGCTGATTTCAACGTTGATGCCTATTCCGCGGCATCACTTAAAGCTAACTCATATGCTTATCCCGGAATGAGGCCTACAAGGTTCACAGGCGGCCAAATTATCATGCCTCTTGGCCATACGATTGAACATGAAGAGATGATCGAAGTCATTCGGCTAGAAGGTCACTCCATTGCTCAAGAAGATGCTTTCGTTTCAAGAGACATTCATCTCTTACAGgTATGTGGTGGAATTGATGAGAATGCTGTGGGGGCTTGTTCTGAACTCATATTTGCTCCGATAGACGAAATGTTTCCCGATGATGCTCCATTGGTTCCTTCTGGTTTCCGAATCATTCCTTTGGATTCAAAAGCAGGTGATAAAAAGGATCCAGTGGCTACGAATCGTACTCTGGATCTGACATCTGGTCTTGAAGTTGGCCCTGCAACAAATCATGCTGCAGGAGATGGATCATGTCATAGCACTCGATCAGTGTTGACAATTGCCTTTCAGTTTCCTTTTGACACCAGTTTGCAGGATAACGTTGCAATTATGGCACGGCAGTATGTCCGTAGCGTCATTTCCTCTGTACAGAGAGTTGCCATGGCTATATCTCCGTCTGAATTACTGAAATCAGAGTCTCTTGTTAGTGAGTCTGTGTTGAAACATCTATGGCATCATCAGGATGCGATTTTGTGCTGTTCGTTGAAGTCGCTACCCGTGTTCATATTTGCAAACCAGGCAGGTCTTGACATGCTAGAAACAACTCTAGTGGCTTTACAGGACATCTCattggataaaatattttatgaggCTGGACGCAAGACATTGTTTGCGGACTTTGCTAAGTTAATGCAGCAGGGGTTCGCTTATCTGCCGGCGGGGATCTGCATGTCCACCATGGGGCGGCACGTTTCATATGAGCAAGCTATCGCATGGAAAGTGCTTGCTGCCGAAGATAACACTGTTCATTGCTTAGCTTTCGCCTTTGTAAACTGGTCTTttgtatg 2420 0.4682 MAMVVAQHRESSSGSINKHLDAGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIDPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMRQQLQTAPGATDASCDSVDTTPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYTQAYAPTTLAPARDFWTLRYTTSLENGSLVVCQRSLSGSGAGPNAAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEPWSVPEVLRPLYESSKVVAQKMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFSDDGWSVLNCDGAEDVIIAVNSTKNLSATSNPASSLTFVGGILCAKASMLLQNVPAAVLVRFLREHRSEWADFNVDAYSAASLKANSYAYPGMRPTRFTGGQIIMPLGHTIEHEEMIEVIRLEGHSIAQEDAFVSRDIHLLQVCGGIDENAVGACSELIFAPIDEMFPDDAPLVPSGFRIIPLDSKAGDKKDPVATNRTLDLTSGLEVGPATNHAAGDGSCHSTRSVLTIAFQFPFDTSLQDNVAIMARQYVRSVISSVQRVAMAISPSELLKSESLVSESVLKHLWHHQDAILCCSLKSLPVFIFANQAGLDMLETTLVALQDISLDKIFYEAGRKTLFADFAKLMQQGFAYLPAGICMSTMGRHVSYEQAIAWKVLAAEDNTVHCLAFAFVNWSFV 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02396 806 SMART HOX_1 21 87 IPR001356 GO:0003677
Bva07g02396 806 SMART START_1 161 371 IPR002913 GO:0008289
Bva07g02396 806 Pfam MEKHLA domain 677 805 IPR013978 -
Bva07g02396 806 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 678 806 - -
Bva07g02396 806 CDD homeodomain 24 84 IPR001356 GO:0003677
Bva07g02396 806 ProSiteProfiles 'Homeobox' domain profile. 19 83 IPR001356 GO:0003677
Bva07g02396 806 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 678 - -
Bva07g02396 806 SUPERFAMILY Bet v1-like 161 373 - -
Bva07g02396 806 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 678 IPR044830 GO:0003700
Bva07g02396 806 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 678 806 IPR044830 GO:0003700
Bva07g02396 806 ProSiteProfiles START domain profile. 152 380 IPR002913 GO:0008289
Bva07g02396 806 CDD START_ArGLABRA2_like 156 372 - -
Bva07g02396 806 MobiDBLite consensus disorder prediction 134 153 - -
Bva07g02396 806 Gene3D - 196 377 IPR023393 -
Bva07g02396 806 SUPERFAMILY Homeodomain-like 23 86 IPR009057 -
Bva07g02396 806 Coils Coil 93 120 - -
Bva07g02396 806 CDD bZIP 76 115 - -
Bva07g02396 806 Gene3D - 17 90 - -
Bva07g02396 806 Pfam Homeodomain 24 82 IPR001356 GO:0003677
Bva07g02396 806 Pfam START domain 162 370 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02396 Bva-Chr7 19456185 19462601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02396 1 806 Homeobox Transcription Factor Family AT5G60690 79.457 0.0 1373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva07g02396 START 5.9e-48 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02396 K09338 - gmx:100804870 1430.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02396 07 19456185 19462601 Bva07g02396 07 19456185 19462601 ECH
Bva09g00251 09 1273043 1279859 Bva07g02396 07 19456185 19462601 ECH