Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02392 ATGTCAGAGGATATCACAAATATGAAGGATTCGTGGTTTTTGGACAAGAATTTTAGTGGCCTCTCggatgaaatatttgatgatgCCATGAAGCTTCTTGATTTCCCACTAGAAgatttggaaaataattttccgGAGGAAGATTGGGATGCTCAACTGAAACACCTTGAAGACCCATCTTTTGATGTTTTCTCAGTGCCTTCATATGGGTTGTGTGATAGTACTCAATATGACAATCCAAAACTAAAACTTGGGAGGAGCTTCTCAGCTTGTAATGAGATTTCTCCAATAAAACAACAGACGGAAACTCTGGGATTCGCTTATACTAAATGCATTCCCAACCCTAATGTCTCTTCCAACGGTAAAGACTTACACCTCTTCCGGACCTACAGCCCAGTTTCAGTTTTTGAAAGCAGCAGTTCTTCCTCAGGTGAGAATTGTTTCTTTGATCTACCTGTCATCCCAGTAAAGGGTACTCGAAGCAAACGTCAACGTCTGTCGAACTTGAGTCCTCTGTTCTCGATTTCTTTCATCCATACTTCACCAGCTTTGCAAAAATCTCAAAGGACTGCTGCCTCTGAACTAGACTTAGAAACACAGCTTAACGGGAAGTTACTAAACAGAGTCAAAAAGCAGAGGAAAAAGGATGTCTCCCTGTTCTCATTCCCCATCGAGAGGAAGAGATCCTCATCGCAAGAGTCAgttgtgcccagaaaatgcATGCATTGTGAGGTGACAAAAACCCCACAATGGAGGGAGGGCCCCCTGGGTCCAAAGACTCTTTGCAATGCTTGTGGAGTTCGATACAGGTCCGGACGCCTCTTCCCCGAGTACCGGCCTGCAGCTAGTCCCACTTTCGTAGAATCAGTGCACTCCAACTGTCACAAGAAGGTCATAGAGATGAGAAACAGAGCCATCCAGTCCCAGAAGGCTGTTAGGGGTTCAATATA 950 0.4211 MSEDITNMKDSWFLDKNFSGLSDEIFDDAMKLLDFPLEDLENNFPEEDWDAQLKHLEDPSFDVFSVPSYGLCDSTQYDNPKLKLGRSFSACNEISPIKQQTETLGFAYTKCIPNPNVSSNGKDLHLFRTYSPVSVFESSSSSSGENCFFDLPVIPVKGTRSKRQRLSNLSPLFSISFIHTSPALQKSQRTAASELDLETQLNGKLLNRVKKQRKKDVSLFSFPIERKRSSSQESVVPRKCMHCEVTKTPQWREGPLGPKTLCNACGVRYRSGRLFPEYRPAASPTFVESVHSNCHKKVIEMRNRAIQSQKAVRGSI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02392 316 SMART GATA_3 234 284 IPR000679 GO:0006355|GO:0043565
Bva07g02392 316 PANTHER GATA TRANSCRIPTION FACTOR 13-RELATED 28 304 - -
Bva07g02392 316 Gene3D - 230 311 IPR013088 GO:0006355|GO:0008270
Bva07g02392 316 CDD ZnF_GATA 239 286 IPR000679 GO:0006355|GO:0043565
Bva07g02392 316 ProSiteProfiles GATA-type zinc finger domain profile. 234 270 IPR000679 GO:0006355|GO:0043565
Bva07g02392 316 Coils Coil 315 316 - -
Bva07g02392 316 Pfam GATA zinc finger 240 273 IPR000679 GO:0006355|GO:0043565
Bva07g02392 316 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 236 295 - -
Bva07g02392 316 PANTHER GATA TRANSCRIPTION FACTOR 28 304 - -
Bva07g02392 316 ProSitePatterns GATA-type zinc finger domain. 240 265 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02392 Bva-Chr7 19423800 19427685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02392 15 304 C2C2-Gata Transcription Factor Family AT1G08010 39.456 3.30e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bva07g02392 GATA 2e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02392 - - gmx:100778675 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00256 09 1307116 1310593 Bva07g02392 07 19423800 19427685 BWGD
Bva07g02392 07 19423800 19427685 Bva07g02392 07 19423800 19427685 ECH
Bva09g00256 09 1307116 1310593 Bva07g02392 07 19423800 19427685 ECH