Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02385 ATGGGTTTTGGTAATTCAAGATCTGTAAGATTTCAAGAGGATCCTGAAGTAGCACAAGTGCCTGTAACTAACGGTGAAAATGAGATGAAGCTCATGTACAACATTGATGGAACACAAATACATGAGCCTAGCTCTAGCACCAATAAGGCTCAGAAGAAGGCGACAGGTAAGACTGGAAAGTTCTTGAAAGCTAAAGTATTGTCAAGAGTATTCTCAGAGGATTATGAGAGAGTGAAAAGAAGAATACTAGATCCTCGGGGACAAACCATTCAGCGGTGGAACAAGATTTTCCTGGTAGCATGTTTGGTATCCTTGTTTGTGGACCcgctcttcttttatttgccAGTAGTTCGAGATGAATTATGCATTGATATTGGAATAACTCTTGAAGTTATCCTCACAATTGTCAGAACAGCGGCGGATATATTTTACATGATTCAGATTTTCATGAGGTTTCGTACAGCTTATGTTGCTCCTTCTTCCCGGGTATTTGGGAGAGGAGAGCTTGTTATAGATTCTTCTAAGATAGCATTTAAGTACTTATGTAAGGGTTTCTTGTTAGACTTCATTGCTGCCCTGCCCCTTCCTCAGGTGTTAATTTGGTTTGTCATCCCCAATCTTAGGGGTTCAACCATGGCAAACACAAAAAATGTCCTACggtttatcatcatttttcaGTATCTCCCGCGACTCTTTCTGATTTTTCCACTTTCATCACAAATAATAAAGGCTACAGGGGTTGCTACAGAAACAGCATGGGCAGGGGCTGCTTACAACCTGATGCTTTACATGTTGGCAAGCCATGTTTTAGGAGCTTGCTGGTACCTTCTATCAATTGAGCGACAAGAAGCATGCTGGAGAAGTGTCTGCAATCTGGAGAAATCATCTTGTGAATATGGATTCTTCGACTGCCACAGGGTTCAGGATTCCCGCAGAGTCTCGTGGTTCACAACGAGTAATGTCACAAATTTGTGCTCACCAGATGTTGACTTTTATCAGTTTGGTATTTACGGTGATGCAGTAACATCTCAAGTTACAAGCTCGGCATTCTTTAATAAGTACTTTTACTGCCTGTGGTGGGGCCTAAGGAATCTGAGTTCCTTGGGACAAAGTCTTCTTACTAGTACTTTTGTTGGAGAAATAGTGTTCGCCATCATTGTTGCAACCCTTGGATTGGTTCTGTTTGCATTGCTCATTGGTAATATGCAGACATACCTGCAGTCAACAACTGTCCGGTTAGAAGAATGGAGGGTCAAAAGAACTGATACAGAACAGTGGATGCATCACAGGCAGCTACCCCAAGAACTAAGACAATCTGTGCGGAAATATGATCAATATAAATGGCTGGCTACACGAGGAGTAGATGAAGAGGCTCTTCTCAAAGGGCTTCCCTTGGATCTTCGGAGAGACATTAAGCGCCACCTTTGTCTTGACCTTGTCCGAGGAGTTCCTTTGTTTGATCAAATGGATGAGAGGATGCTAGACGCAATATGCGAAAGGTTGAAGCCTGCATTGTGCACCGAGGGTACCTATCTGGTTCGCGAAGGCGATCCAGTAAATGAGATGCTCTTCATAATTCGAGGCCATCTTGATTCTTACACCACCAATGGAGGCCGCACTGGATTCTTTAATTCATGCCGTATTGGACCTGGCGATTTCTGTGGCGAAGAACTCTTGACATGGGCATTGGACCCACGACCAAGCGTCATTCTTCCTTCCTCCACTAGAACTGTCAAAGCCATCTCCGAAGTGGAAGCCTTTGCTCTCATAGCAGAAGACCTCAAGTTCGTTGCATCTCAATTTAGAAGACTGCACAGTAAACAACTTAGAAACAAGTTCAGATTTTACTCACACCAATGGCGAACATGGGCTGCTTGTTTCATCCAATCTGCATGGAGACGATATAAGAAACGAAAGGAAATTGCACAACTCAGGGCTAAGGAAAATTCAACACGTACAATTGCCGAACCCGAAACCCCAGCATTTGTAGTAAGGCTGGCCAGGAGCACTAGAAAAGGTGTCACTGCGCATCCTGGCACAGATTCTGGAGTAGTCACCTCTTTGCAGAAACCTGCGGAACCCGACTTTTCTGTTGACGACTG 2102 0.432 MGFGNSRSVRFQEDPEVAQVPVTNGENEMKLMYNIDGTQIHEPSSSTNKAQKKATGKTGKFLKAKVLSRVFSEDYERVKRRILDPRGQTIQRWNKIFLVACLVSLFVDPLFFYLPVVRDELCIDIGITLEVILTIVRTAADIFYMIQIFMRFRTAYVAPSSRVFGRGELVIDSSKIAFKYLCKGFLLDFIAALPLPQVLIWFVIPNLRGSTMANTKNVLRFIIIFQYLPRLFLIFPLSSQIIKATGVATETAWAGAAYNLMLYMLASHVLGACWYLLSIERQEACWRSVCNLEKSSCEYGFFDCHRVQDSRRVSWFTTSNVTNLCSPDVDFYQFGIYGDAVTSQVTSSAFFNKYFYCLWWGLRNLSSLGQSLLTSTFVGEIVFAIIVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPQELRQSVRKYDQYKWLATRGVDEEALLKGLPLDLRRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRNKFRFYSHQWRTWAACFIQSAWRRYKKRKEIAQLRAKENSTRTIAEPETPAFVVRLARSTRKGVTAHPGTDSGVVTSLQKPAEPDFSVDD 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02385 700 Pfam Ion transport protein 92 412 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva07g02385 700 SUPERFAMILY cAMP-binding domain-like 415 612 IPR018490 -
Bva07g02385 700 Pfam Cyclic nucleotide-binding domain 508 595 IPR000595 -
Bva07g02385 700 Gene3D Jelly Rolls 483 603 IPR014710 -
Bva07g02385 700 Gene3D Helix hairpin bin 412 476 - -
Bva07g02385 700 ProSiteProfiles IQ motif profile. 621 650 IPR000048 GO:0005515
Bva07g02385 700 SUPERFAMILY Voltage-gated potassium channels 84 407 - -
Bva07g02385 700 PRINTS EAG/ELK/ERG potassium channel family signature 398 407 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva07g02385 700 PRINTS EAG/ELK/ERG potassium channel family signature 354 371 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva07g02385 700 PRINTS EAG/ELK/ERG potassium channel family signature 148 157 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva07g02385 700 PRINTS EAG/ELK/ERG potassium channel family signature 448 455 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva07g02385 700 PRINTS EAG/ELK/ERG potassium channel family signature 265 275 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva07g02385 700 PRINTS EAG/ELK/ERG potassium channel family signature 380 391 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva07g02385 700 ProSiteProfiles cAMP/cGMP binding motif profile. 485 582 IPR000595 -
Bva07g02385 700 PANTHER - 4 700 - -
Bva07g02385 700 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 700 - -
Bva07g02385 700 CDD CAP_ED 485 616 IPR000595 -
Bva07g02385 700 SMART cnmp_10 485 616 IPR000595 -
Bva07g02385 700 MobiDBLite consensus disorder prediction 671 700 - -
Bva07g02385 700 Gene3D - 95 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02385 Bva-Chr7 19375079 19379365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02385 59 699 Ion Channels AT2G28260 78.627 0.0 1046
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02385 K05391 - gmx:100786868 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00262 09 1346974 1350585 Bva07g02385 07 19375079 19379365 BWGD
Bva07g02385 07 19375079 19379365 Bva07g02385 07 19375079 19379365 ECH