Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02380 ATGGAGAGCAGCATGACTAATGGGATTGATAGTTATGGCATCACAACTGGTTTTGGAGCCAACTCCCATAGGAGAACTAACCAAGGAGTTGCGCTCCAAATTGAGCTTATTAGGTTTCTCAATGCTGGAATCTTTGGTGGGGGAATGGGAGTGAAGAGAGGCATAGTTTGCCACACAGTGCAACAAGAGCTGCAATGCTGCCTTAGGGGACGTGATTCCATTCCCTTTTCATATATTGCTGCTCTTCTCACGGGAAGGCCTAATTCAAAGGCTGTTGGACCCAATGGTGAGTCCCTTACTGCACCAGAAGCTCTCAGTTCAGCTGGTATTCGCCAAGCCTTCTATCAATTGTGGGTCTTGCACTTGTTAGTGGAACTGGAGTTGGAGCTCCATTGTCCTCAAATTGAAGTGATTCGTTCATCAACAAAAACCATTGAGCGAGAGATCAACTCTCTGAATGATAACCCATTGATTGATGTATCAAGCAACAGAGCTTTACATGGTGGCAATTTTCAGGGTACGCCTGTTGGTGTTTCCATGGACAACACAAGATTAGATTTAGCTGCAATTGGGAAACTCCTTTTTGCTCAAATGTCTGAGATGGTTAATGATTTCTACAACAATGGTTTACCTTCAAATCTCTCTGGGGGCCGCTTTCCAAGCTTGGATTATGGAATGAAGGGCGGTGAGATTGCAATGGCATCATATCTAGCTAACCACATTACTAATCACGTCCAAAGTGCTGAGCAACACAACCGAGATGTCAACTCATTAGGACTAATCTCTGCAAGGAAAACTGCTGAAGCTACTGAGATCTTAAAGCTCGTGTCTTCCACATACTTAGACACTCTTTGCCAAGCTATAGATTTGAGGCATTTGGAGGAGAACTTGAAGAAAACTGTTAAGAATACGGTGAGCCAAGTGGCTAAAAAAGTCCTGGCTATAGGCGTCAAGGGGGAGCTTTGTGCTTCAAGATTTTGTGAGAAAGATTTGCTCGAAGTGATTGATCTTGAATATGTTTTTGCCTACAGAGACAATCCATGTAGTTATACATACCCTCTCATGCCAAGACCAAGGCAAGTGCTTGTGGAACAAGCATTGATAAAGGTTGCGAGAAATGCCTTTGAGAAAGGGAGTTCAGCAATTCCTAACAGAATCAAGGAATGCAGATCCTATCCACTTTATAAGTTTGTGAGAGAGGAGTTGCAAACTGAGTTTTCAACTGGTGAGAAAACCAAGTCCCCAGGAGAAGAGTTTGATAAAGTTTTCACTGCCATTAATCAGGGAAAGATGATGGACCCGCTGTTTGAATGCCTCAAGAATTGGGATGGTGTTCCCCTTCCCCCATGTTA 1352 0.4357 MESSMTNGIDSYGITTGFGANSHRRTNQGVALQIELIRFLNAGIFGGGMGVKRGIVCHTVQQELQCCLRGRDSIPFSYIAALLTGRPNSKAVGPNGESLTAPEALSSAGIRQAFYQLWVLHLLVELELELHCPQIEVIRSSTKTIEREINSLNDNPLIDVSSNRALHGGNFQGTPVGVSMDNTRLDLAAIGKLLFAQMSEMVNDFYNNGLPSNLSGGRFPSLDYGMKGGEIAMASYLANHITNHVQSAEQHNRDVNSLGLISARKTAEATEILKLVSSTYLDTLCQAIDLRHLEENLKKTVKNTVSQVAKKVLAIGVKGELCASRFCEKDLLEVIDLEYVFAYRDNPCSYTYPLMPRPRQVLVEQALIKVARNAFEKGSSAIPNRIKECRSYPLYKFVREELQTEFSTGEKTKSPGEEFDKVFTAINQGKMMDPLFECLKNWDGVPLPPC 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02380 450 Gene3D - 1 63 IPR024083 -
Bva07g02380 450 PANTHER PHENYLALANINE AMMONIA-LYASE 369 450 - -
Bva07g02380 450 SUPERFAMILY L-aspartase-like 4 450 IPR008948 GO:0003824
Bva07g02380 450 Gene3D - 64 119 IPR024083 -
Bva07g02380 450 Gene3D Fumarase/aspartase (Central domain) 385 444 - -
Bva07g02380 450 Gene3D Fumarase/aspartase (Central domain) 133 293 - -
Bva07g02380 450 Gene3D - 370 384 IPR023144 -
Bva07g02380 450 Gene3D - 294 368 IPR023144 -
Bva07g02380 450 PANTHER HISTIDINE AMMONIA-LYASE 369 450 IPR001106 -
Bva07g02380 450 PANTHER PHENYLALANINE AMMONIA-LYASE 72 117 - -
Bva07g02380 450 PANTHER PHENYLALANINE AMMONIA-LYASE 132 368 - -
Bva07g02380 450 PANTHER PHENYLALANINE AMMONIA-LYASE 3 50 - -
Bva07g02380 450 PANTHER HISTIDINE AMMONIA-LYASE 72 117 IPR001106 -
Bva07g02380 450 PANTHER HISTIDINE AMMONIA-LYASE 132 368 IPR001106 -
Bva07g02380 450 PANTHER HISTIDINE AMMONIA-LYASE 3 50 IPR001106 -
Bva07g02380 450 Pfam Aromatic amino acid lyase 130 305 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02380 Bva-Chr7 19353355 19355452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02380 133 450 Monolignol Biosynthesis Gene Families AT2G37040 66.479 3.91e-168 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02380 K10775 - dcr:108223317 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02380 07 19353355 19355452 Bva07g02380 07 19353355 19355452 ECH