Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02378 ATGTCGTTGATCTTCGAAATCATGATTTGTTATCTCTGTTTTGTTGCCTGGATCTGCATAAGTTCCAGTTCCGCTCAGCAGTATTACGATCCTTCAAATTGTTCTTCTTCAGAAAACAGCAACTCAGGGTCAAGATACACTTGTAATTTACCCCATGATTCATGCAGCACGTTCTTGGTTTACAGAGCTAACCAGAATTTCCAAACCATTTCAGATATCTCAAAGCTCTTCAATATGAGCTCTGACGGGCTACTTCAAATAAACAATCTCACATCTTCTTCCCAGGTGCTCAAACCAGGTAAAGAggttcttcttccttttaactGTTCCTGCTCTGTAGGCCTGTTTTATCAAGCCAATTTAACCTATAAAACCCCAGAAACTACAACATTTTCAGAGGTTGCTTGTGGGGTATTTGAGGGGCTGCTAAAATCTAAAACTCTTGCCGAGGAAAACCTCCCTCATATAAATGATCTCGAAGCTGGTTCTGTACTTTATGTGCCTCTTAGATGTGCATGCCCTGACAATTTCACTAGTGGCAAAAGGGTGAAGTACCTTATAACATACCCTATAATACAAGGTGATGATCCAAACCAATTGAGTCAGAAATTTGACATCTCAACGGAAGATTTCTTGGAAGTAAATACCCTAGCTCGTCTGGACCCTCTTTTCCCAGATACAACTGTGTTAATTCCAATAAGTGCTACCCCAATCAGCATTTCTCAACTTCCAGATTCTCCACCCCCAACTCCTGAATTTCTTTACACAATTCCAGCGGAAAAGGAACAAGAAGCTAGAAAACCTGCTCATTTGTATGTTGCAAGCTCTATTATTGGTTCGTTCCTGTTGCTTATATTAATGCTTGCATGTGGATTTTCGATGAAGGGCTTAAGGAAATGGAAAAGTGAAAATCTCAAGGTTTTCACAGTATCAAACTCCCTCAACTCATGCTCACCGATGGGTAGCTCTCCTAGATCTACCCAAACGGGTACAGCCTCTTTAACTTCATGCCTGTCTCCTGATCTTCTAGTTGGAATAAAGTACCGTTTGCTCAATTACAGCATAGAAGAACTCAAAAAGGCAACTAAAGATTTCAGTGAAGAAACCAAGATTGATGGTTCAACCTTTAAGGGTTTACTCAATGATATTGAGGTAATGATCAAAAGGGTGAGGTTTGAAGACATTCGCCCCGTAATTGATTTACATTCTAAAATCAATCACATCAATATTGTGACCTTACTTGGTGTTTGTTACAGCGAGAGTGATTTTTCCTGGTCTTGTTTAGTTTTTGAAATGCCCAAAAATGGCTGCTTGAGGGACTGTTTATCTGATCCATGCAATCCCCTTCACTGGCACAGAAGGACACAAATAGCTTTTGATATTGCAACAGGTCTTCACTATTTGCATTGCTGTGCTTTTCCTTCCTATGCTCACATGAAGATTAGTAGTAGAAATATATTCATAACAGCAAACTGGAGAGCAAAATTGGCAGATATTGGAATGGCTTCTGCTACTAAACTTGCCAGAGGAAATGATAGAACAGAAAATCACAAAGGATGGGTTGCACCAGAGTATCTTCTCCACGGCTCAGTTAGTGAGACGGTTGACATTTTTGCATTTGGAGTTGTCTTGCTTGAACTGATCGCAGCAAAAGACAACATTGatgaaaaatcattcaaaGACTCTATTGGTTTTTTGGGAGAGCCAGACAGTGAAAGAGGTTGCTTTGAAGGACTGAGGGGTCTCATGGATCCTAATCTGAAAGATTATCCTCTTGCAGAAGCTTTATGTTTGGCTGTTTTAGCAAAGGCTTGTGTGGCAGATGATCCCCAGCATAGACCAACTATGGATGATATCATGAAAGTTCTTGGAAGAATGACTTA 1883 0.3962 MSLIFEIMICYLCFVAWICISSSSAQQYYDPSNCSSSENSNSGSRYTCNLPHDSCSTFLVYRANQNFQTISDISKLFNMSSDGLLQINNLTSSSQVLKPGKEVLLPFNCSCSVGLFYQANLTYKTPETTTFSEVACGVFEGLLKSKTLAEENLPHINDLEAGSVLYVPLRCACPDNFTSGKRVKYLITYPIIQGDDPNQLSQKFDISTEDFLEVNTLARLDPLFPDTTVLIPISATPISISQLPDSPPPTPEFLYTIPAEKEQEARKPAHLYVASSIIGSFLLLILMLACGFSMKGLRKWKSENLKVFTVSNSLNSCSPMGSSPRSTQTGTASLTSCLSPDLLVGIKYRLLNYSIEELKKATKDFSEETKIDGSTFKGLLNDIEVMIKRVRFEDIRPVIDLHSKINHINIVTLLGVCYSESDFSWSCLVFEMPKNGCLRDCLSDPCNPLHWHRRTQIAFDIATGLHYLHCCAFPSYAHMKISSRNIFITANWRAKLADIGMASATKLARGNDRTENHKGWVAPEYLLHGSVSETVDIFAFGVVLLELIAAKDNIDEKSFKDSIGFLGEPDSERGCFEGLRGLMDPNLKDYPLAEALCLAVLAKACVADDPQHRPTMDDIMKVLGRMT 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02378 627 ProSiteProfiles LysM domain profile. 187 231 IPR018392 -
Bva07g02378 627 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 13 626 - -
Bva07g02378 627 ProSiteProfiles Protein kinase domain profile. 314 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02378 627 Gene3D Phosphorylase Kinase; domain 1 338 431 - -
Bva07g02378 627 SMART LysM_2 60 106 IPR018392 -
Bva07g02378 627 SMART LysM_2 188 232 IPR018392 -
Bva07g02378 627 Gene3D Transferase(Phosphotransferase) domain 1 433 627 - -
Bva07g02378 627 Pfam LysM domain 193 232 IPR018392 -
Bva07g02378 627 Pfam LysM domain 69 106 IPR018392 -
Bva07g02378 627 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 13 626 - -
Bva07g02378 627 SUPERFAMILY Protein kinase-like (PK-like) 348 623 IPR011009 -
Bva07g02378 627 Pfam Protein tyrosine and serine/threonine kinase 400 622 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02378 Bva-Chr7 19338553 19340436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02378 12 626 Receptor kinase-like Gene Family AT2G23770 31.111 2.43e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva07g02378 PK_Tyr_Ser-Thr 2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02378 - - gmx:100818937 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02378 07 19338553 19340436 Bva07g02378 07 19338553 19340436 ECH