Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02374 ATGAGTAGCCTAAGGCCTGAATCGCACGTAACACAGCAAATCCGGCGTGAGAAGTTGAGAATCCAGCAATTGCAAGATTTTCCTAACAATCTGGAACAATCATCATTACACCCAGGATTAAACTCGGATCTTGTTCATGTTAGAAATGTTAGAAATGCCAATATGCTTTATGAACCAGCCTTCTATTCTTCAGAAATGGTCAATATTTCCCCCGCTTTGAATCCTTTATTTGCTGATAGGGACGCCGCAATGACATGTCAGGAACTGGGTGCAGTGCCTCAGTTTTCTGAATCGTTTCCCCATTCATCCGACCCAGCATCTTCCAGCATTCATGCTCCCTCCAAAGAAGGTGCACCACGTAACTTTGGCAGTTGGAGAAACAGTGGCTCACATCAAGGCTATGATTGGATGGTGAATTATGCAACTAGTTCTGTGCCAAACGAAACCATCCCGAATTCTCTTGTTGCTGCTGAGCTCAATAACGTGTCTGCTTATCAGCAATACATGAAGCCTAGCTACAATGAACTCAACGATGTACAGTGTTCTCTAAGCAACATTTCAATGTCCAATCGAGAAAGCCAAAGGCAGTTTGGGGGAACACATAATCCTTCTGCTTCTCCTCCACTGTATCACAACACTTTACAGGATATTGTCAAGTCAGCTTCTATCAGTGCCCAAGGCTCAGAAATGGCTTCAGTGATACAGCAAAATGGCCATGGCATTTGGGATGGAAATGGTAGCGAGCTTGTTCTTCTTCCACACACGGGCTATGAAAATCCTAATTATCGAACTGGCCATGATTCCCTTAGttggaataataataataatgataataataatccaTTGGGTTTTACAACAAGAAAGAGCGAACAAGACTCGGGACCTGTCCTCAGTGATTCAAACCCTCATGGCTTGTCTTTATCACTCTCATCAAATGCACAGTCCAAGCTTTCAGTTTCTCAGTTTGGAGAAGGGTGTGGCTCAGAGAAATCTATATTAAAACCCTCTGTCATTTCTAAAGATTCTGGCAAGTCAATTCAAGACATAGTGGGAGGGACACCTTCAAATGCTGGTTATCGAAATGTGGGCCCTCTGGGCCCATTCACTGGATATGCAACCATTTTGAAGAATTCGAGATTCATAAGGCCCGCCCAGCAGTTGTTAGATGAGTTCTGCTGTAATTTCTCTTGTCCAAAACCAAGCAAGGCGCGCGATGTTTCTGAGAGGGTCTCTAGAGAAGCCAGTGCTTCTGCTGAAGCTTTTAACGCACCTGACGAAGGGATTGGTGCAAGGGCTAGTTGTTCAGGCGCTTCGTCTTCTATGTTTTATAGTTCAAAGTCAAACGAAATGAATAGCGGTGATGGCGGAGCCGGAAGTAGCTTGTGTCCGTCATCTTGGCCGGAGTATCAACAAAAAAAGGCAAAACTCCTGTacatgcaagaagagGTTACAAGAAGATACAAACAATACCATCAGCAAATGCAAATGGTTGTTTCGTCCTTTCAGTCAGTAGCGGGGTTAAGTTCTGCTACTCCTTACATCTCCACAGCTCTAAAGTCAGTGTCAAGACACTTCAGGTGCCTTAAAAATGCAATCACAGATCAGCTCAAGCATATAAGAGAAGTGTTAGGAGAGGATTCCTCGGCTGGTACAAGTAGTAAGCTtgacaataacaataatgcGGCAAGGCTAAGGTTCATGGACCACAGCTTTCTAAAGAACAAATCCAGCGGGGGTAACATGGCCTTTCTTGAACCCCAGCACCATGTCTGGAGGCCCCAGAGAGGTCTACCAGAACGTTCTGTGGCAATTCTTAGAGCTTGGTTGTTCGAACATTTTCTTCACCCGTACCCCACGGACACTGATAAACACATGTTGGCTACTCAAACGGGTCTATCAAGAAATCAGGTATCAAATTGGTTCATTAATGCTCGAGTCCGTGTGTGGAAGCCAATGGTTGAGGAAATACACTCGCTTGAGGCGAAAGGCTTGATGGGTGCTAATCAAAACTCGACTAAGTGTGAGGGAATTTGTGCCAACGAAGGTACTAGCCAGTCTAGAGTTGATCAATCTTCAAACAAGTTTGGGGCACCTGAAAAGCAAATGGAATGCTTGGAAATGGGATCGTATGCGAGTGGTAGGGACGAAGAGGGGCTAAGTGCAGAAGATTGGAATCAAGAGAAGCGGTCTAAAATGGACTGTGAGATCACATCTAGCATGGATGGGACGCTGATGGGGTTTGTGCCATACAGAAGGGCTGGTGCTGAGGTTGGTGGTCTTGGATCAGTGTCACTCACATTGGGTCTGAGACATGGCGTTGAAGGTGCACAACACGTACAACAGCACGAGTTACAACAAGAGGATCAGGTTAGACATCACTTTGGAGGGCAGATGATCCATGACTTTGTGGGCTG 2414 0.4437 MSSLRPESHVTQQIRREKLRIQQLQDFPNNLEQSSLHPGLNSDLVHVRNVRNANMLYEPAFYSSEMVNISPALNPLFADRDAAMTCQELGAVPQFSESFPHSSDPASSSIHAPSKEGAPRNFGSWRNSGSHQGYDWMVNYATSSVPNETIPNSLVAAELNNVSAYQQYMKPSYNELNDVQCSLSNISMSNRESQRQFGGTHNPSASPPLYHNTLQDIVKSASISAQGSEMASVIQQNGHGIWDGNGSELVLLPHTGYENPNYRTGHDSLSWNNNNNDNNNPLGFTTRKSEQDSGPVLSDSNPHGLSLSLSSNAQSKLSVSQFGEGCGSEKSILKPSVISKDSGKSIQDIVGGTPSNAGYRNVGPLGPFTGYATILKNSRFIRPAQQLLDEFCCNFSCPKPSKARDVSERVSREASASAEAFNAPDEGIGARASCSGASSSMFYSSKSNEMNSGDGGAGSSLCPSSWPEYQQKKAKLLYMQEEVTRRYKQYHQQMQMVVSSFQSVAGLSSATPYISTALKSVSRHFRCLKNAITDQLKHIREVLGEDSSAGTSSKLDNNNNAARLRFMDHSFLKNKSSGGNMAFLEPQHHVWRPQRGLPERSVAILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHSLEAKGLMGANQNSTKCEGICANEGTSQSRVDQSSNKFGAPEKQMECLEMGSYASGRDEEGLSAEDWNQEKRSKMDCEITSSMDGTLMGFVPYRRAGAEVGGLGSVSLTLGLRHGVEGAQHVQQHELQQEDQVRHHFGGQMIHDFVG 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02374 804 SMART prehox3 369 534 IPR006563 -
Bva07g02374 804 MobiDBLite consensus disorder prediction 95 125 - -
Bva07g02374 804 Gene3D - 594 656 - -
Bva07g02374 804 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 26 773 - -
Bva07g02374 804 SMART HOX_1 591 655 IPR001356 GO:0003677
Bva07g02374 804 Pfam Homeobox KN domain 608 647 IPR008422 GO:0003677|GO:0006355
Bva07g02374 804 MobiDBLite consensus disorder prediction 96 110 - -
Bva07g02374 804 MobiDBLite consensus disorder prediction 267 308 - -
Bva07g02374 804 SUPERFAMILY Homeodomain-like 593 658 IPR009057 -
Bva07g02374 804 ProSiteProfiles 'Homeobox' domain profile. 588 651 IPR001356 GO:0003677
Bva07g02374 804 Pfam Associated with HOX 374 533 IPR006563 -
Bva07g02374 804 CDD homeodomain 591 652 IPR001356 GO:0003677
Bva07g02374 804 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 26 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02374 Bva-Chr7 19317391 19323597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02374 370 660 Homeobox Transcription Factor Family AT1G19700 43.243 1.05e-67 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bva07g02374 POX 2.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02374 - - qsu:112035238 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00270 09 1399261 1406207 Bva07g02374 07 19317391 19323597 BWGD
Bva07g02374 07 19317391 19323597 Bva07g02374 07 19317391 19323597 ECH