LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva07g02363	ATGGCTGATATTGAGGGATCTCCAGGAAGCTCCATGCATGGAGTTACAGGCAGAGAGCAAACCTATATTTCCTCAGTTTCTTCCCCAATGGTTCCAACTGACACAACTGCCAACTTTGCCCTTCCTGTTGATTCAGAGCACAAGGCCAAAGTGTTCAAACTCTTCTCCCTTGCCAACCCCCACATGAGAACCTTCCACCTATCTTGGATCTCCTTCTTCACTTGCTTCGTTTCCACTTTTGCAGCTGCTCCTCTTGTTCCCATCATTCGTGATAATCTCAACCTCACAAAATTTGACATTGGGAATGCCGGGGTTGCTTCTGTTTCGGGGAGCATCTTCTCTAGGCTTACAATGGGTGCAGTTTGTGACCTTTTAGGCCCACGTTACGGCTGCGCCTTCCTTATCATGCTCTCGGCTCCAACTGTGTTCTGCATGTCATTTGTGAAAGATGCTGCTGGTTACATAGTAGTAAGGTTCTTGATTGGGTTCTCACTGGCCACTTTTGTTTCGTGCCAATACTGGATGAGCACAATGTTCAATAGCAAGATCATAGGACTTGCCAATGGAACTGCTGCAGGATGGGGTAACATGGGTGGGGGAGCCACTCAGCTTATAATGCCCTTGGTGTATGAGTTGATAAGAAAAGCTGGTGCAACTCCTTTCACTGCATGGAGGATTGCCTTCTTCATCCCTGGTTGGATGCATATCGTCATGGGGATTTTGGTCTTAACTCTTGGCCAAGACTTGCCTGATGGAAACCTCGGTGCCTTGCAGAAGAAGGGAAATGTTACTAAAGACAAGTTCACCaagGTGTTGTGGTATGCCATAACAAATTACAGGACATGGATTTTCGTTCTCCTCTATGGCTACTCTATGGGAGTTGAATTGACCACTGACAATGTCATTGCTGAGTATTTCTTTGATAGGTTTGATCTCAAGCTTCACACTGCTGGAACCATTGCTGCTGCATTTGGAATGGCTAACCTGGTTGCTCGTCCCTTTGGAGGGTATGCTTCTGATTTTTCAGGTCGGTTGTTTGGCATGAGAGGCAGGCTTTGGACCTTATGGATCCTCCAAACCCTAGGAGGGGTTTTCTGCATTTGGCTTGGCCGTGCCAATTCTCTTCCTATCTCTGTATTGGCTATGATTCTATTCTCTATTGGAGCTCAAGCTGCATGTGGTGCAACTTTTGGCATTATCCCATTCATTTCAAGGAGGTCTCTGGGGATTATATCAGGTCTAACTGGTGCAGGTGGCAACTTTGGTTCTGGCCTGACCCAgttggttttcttttcaaccTCAAGATTCTCGACATCTACAGGTCTCTCCTTGATGGGAATCATGATTGTATGCTGCACTCTTCCCGTGACTCTGGTTCACTTCCCACAGTGGGGTGGCATGTTCACTCCTCCTTCCAAAGATGTTGAGAGATCCACtgaagaatattattatacttCTGAGTGGAATGAAGAAGAGAGGCAGAAGGGCTTGCACCACAACAGTCTAAAGTTTGCAGAGAACAGCCGCTCCGAGAGAGGCAAGCGTGTAGCCTCTGCCCCAACTCCACCAAATACAACTCCCAACCACGTCTA	1592	0.4629	MADIEGSPGSSMHGVTGREQTYISSVSSPMVPTDTTANFALPVDSEHKAKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKFDIGNAGVASVSGSIFSRLTMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVKDAAGYIVVRFLIGFSLATFVSCQYWMSTMFNSKIIGLANGTAAGWGNMGGGATQLIMPLVYELIRKAGATPFTAWRIAFFIPGWMHIVMGILVLTLGQDLPDGNLGALQKKGNVTKDKFTKVLWYAITNYRTWIFVLLYGYSMGVELTTDNVIAEYFFDRFDLKLHTAGTIAAAFGMANLVARPFGGYASDFSGRLFGMRGRLWTLWILQTLGGVFCIWLGRANSLPISVLAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTSRFSTSTGLSLMGIMIVCCTLPVTLVHFPQWGGMFTPPSKDVERSTEEYYYTSEWNEEERQKGLHHNSLKFAENSRSERGKRVASAPTPPNTTPNHV	530

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Bva07g02363	530	SUPERFAMILY	MFS general substrate transporter	59	460	IPR036259	-
Bva07g02363	530	CDD	MFS_NRT2_like	65	458	IPR044772	GO:0015112
Bva07g02363	530	Pfam	Major Facilitator Superfamily	69	425	IPR011701	GO:0022857\|GO:0055085
Bva07g02363	530	Gene3D	MFS general substrate transporter like domains	58	253	IPR036259	-
Bva07g02363	530	PANTHER	HIGH-AFFINITY NITRATE TRANSPORTER 2.3	1	527	IPR044772	GO:0015112
Bva07g02363	530	MobiDBLite	consensus disorder prediction	490	513	-	-
Bva07g02363	530	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	64	458	IPR020846	GO:0022857
Bva07g02363	530	MobiDBLite	consensus disorder prediction	490	530	-	-
Bva07g02363	530	PANTHER	HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE	1	527	-	-
Bva07g02363	530	Gene3D	MFS general substrate transporter like domains	265	465	IPR036259	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva07g02363	Bva-Chr7	19259405	19261858	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva07g02363	1	530	Inorganic Solute Cotransporters	AT5G60770	79.811	0.0	889

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva07g02363	K02575		-	gmx:100807710	973

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva09g00279	09	1462780	1464069	Bva07g02363	07	19259405	19261858	BWGD
	Bva07g02363	07	19259405	19261858	Bva07g02363	07	19259405	19261858	ECH

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