Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02345 ATGAATGAGTTGAATTGGTGGCATGATGTCACTGTAGGGGTCTATGGTGCCTTTCTCCTTGCCTGCTATGACGGTAATAATGAAGAATTCCAAAGCATTTGTAAGATAGGCACTAGATTTTCTGAAGCAATGCTTGAAGAACGTTCTGCTAGTCTTCGTTTAAAAGTGATTCCCAAACCAAAGCCATACTATCGGTTTGCAGATACAATCAATCCTGATGTATGGTTTGAAGCCTCTGAGGTGTGGGAGGTAAAAGCAAGTGACTTGACCATTAGCCCTGTTCATCGTGCTGCTGTGGGCATAGTTGATTCGGATAAGGGAATTTCACTTCGATTTCCTCGTCTAGTTCGAGTTCGGGATGACAAAGCTCCTGAAGAAGCGTCATCATCTGAGCAGgtTGCTGAGATGTATAATGCTCAAAAGCACAATCACCAGAGCAATCGAGAAGACAGCGAAGATGATTG 464 0.4332 MNELNWWHDVTVGVYGAFLLACYDGNNEEFQSICKIGTRFSEAMLEERSASLRLKVIPKPKPYYRFADTINPDVWFEASEVWEVKASDLTISPVHRAAVGIVDSDKGISLRFPRLVRVRDDKAPEEASSSEQVAEMYNAQKHNHQSNREDSEDD 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02345 154 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 13 154 - -
Bva07g02345 154 CDD OBF_DNA_ligase_I 12 139 - -
Bva07g02345 154 PANTHER DNA LIGASE 1 13 154 - -
Bva07g02345 154 MobiDBLite consensus disorder prediction 120 154 - -
Bva07g02345 154 Gene3D - 6 141 IPR012340 -
Bva07g02345 154 SUPERFAMILY Nucleic acid-binding proteins 13 140 IPR012340 -
Bva07g02345 154 Pfam ATP dependent DNA ligase C terminal region 13 122 IPR012309 GO:0003910|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02345 Bva-Chr7 19151791 19154030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02345 12 154 Core DNA Replication Machinery Family AT1G08130 74.825 6.49e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02345 K10747 - csv:101213447 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02345 07 19151791 19154030 Bva07g02345 07 19151791 19154030 ECH