Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02344 ATGGGAGTGAAGAGCATATTTCCCGCCATTTTCGATAGTGTTTCTCGGCAGAAGGAAAAGATTGTTTGTGTCTCTCTTCCATCTGAAAATTTCCCTGTTACTCTCTTAGCTGCATTGGGCCAAGCTGCTTTGTACACAGAAGAACATTCTACATCACCTGTGGAAATTCAGTCTCCATTAGAAGAGGCTGCAAAGATTATTAGGCAAGTCTATTCTGTCCTTCCTGTTTATGACAAAATAGTCCCTGCCCTGCTAAGTGGTGGTATATGGAAACTTCCAAAGACATGCAAGTTCACTCCTGGTGTTCCGGATGTAGAGTTTACCTGTGAATACAAATACGATGGAGAGCGCACCCAGATACATTACATGGAGAATGGATCGGTTGAAATTTACAGTAGAAATGCTGAACGGAACACTGAAAAGTTTCCTGATGTCGTTGCTGCAGTTTCtagGTTAAAGAAACCATCTTTATCATCCTTTGTTCTCGATTGTGAAATTGTTGCATATGACCGTGAAAAACAGAGAATTCTGCCTTTCCAGGTTCTCAGCACtcgaaaaaataaatatgtggatataaatgagataaaagtCAATGTTTGCatatttgcttttgatttattGTATCTTGATGGACAACCACTTCTTCAGGAACTCCTGAAAATTCGCAGAGAGCATCTCTATGCCTCGTTTGAGGAAGAAACTGGGTTTTTTAAGTTTGCAACGGCAATAACAACAAATGATATTGAGGAAATACTGAAATTTCTTGACACAGCTGTAGATGAGAgTTGTGaggaattaattattaaaacattagATAAAGATGCTACTTCTGAGCCTTCCAAGAAGTCACTCATCTGgctaaaattgaagaaagattaTCTGGAAAAGGGATTCGCTGGATTTGGTACCTATTGCTGCTTTCCATGGTCATGGGAAACGTACTGTTTCTACCATAGGCTTTCAGCTCAAAGTTCTCCTAGTTG 983 0.3703 MGVKSIFPAIFDSVSRQKEKIVCVSLPSENFPVTLLAALGQAALYTEEHSTSPVEIQSPLEEAAKIIRQVYSVLPVYDKIVPALLSGGIWKLPKTCKFTPGVPDVEFTCEYKYDGERTQIHYMENGSVEIYSRNAERNTEKFPDVVAAVSRLKKPSLSSFVLDCEIVAYDREKQRILPFQVLSTRKNKYVDINEIKVNVCIFAFDLLYLDGQPLLQELLKIRREHLYASFEEETGFFKFATAITTNDIEEILKFLDTAVDESCEELIIKTLDKDATSEPSKKSLIWLKLKKDYLEKGFAGFGTYCCFPWSWETYW 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02344 315 PANTHER DNA LIGASE 1 34 296 - -
Bva07g02344 315 Pfam ATP dependent DNA ligase domain 106 290 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bva07g02344 315 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 103 295 - -
Bva07g02344 315 CDD Adenylation_DNA_ligase_I_Euk 95 293 - -
Bva07g02344 315 ProSiteProfiles ATP-dependent DNA ligase family profile. 192 299 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bva07g02344 315 Gene3D - 33 101 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bva07g02344 315 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 34 296 - -
Bva07g02344 315 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 34 97 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bva07g02344 315 Gene3D DNA ligase/mRNA capping enzyme 115 240 - -
Bva07g02344 315 Gene3D - 104 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02344 Bva-Chr7 19150092 19151694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02344 34 295 Core DNA Replication Machinery Family AT1G08130 67.021 4.39e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02344 K10747 - pop:7463320 412.149