Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02342 ATGGTTCTGAAAAAGTCTATTCTTCAGTCATCCTTGGAAGTGGCAAAAACGGAGATTCCATCGCTTTCGGATGCTTCTCCGTTCAATCCCCAACGCCTTTCCTCTGTGGACCATGGACTTGGGAATTTCGGGTGTGCGCATTACAAAAGAAGATGCAAGATCAGAGCACCGTGCTGTAATGAGGTTTTTGACTGCAGGCATTGCCATAATGAAGCTAAGAACTCCGACGAAATAAATCCTCTTGATCATCATGACATCCCACGCCATCAAGTTAAAAAGGTCATCTGCTCCCTGTGTGAAACAGAACAAGATGTTCAACAGTATTGCGTAAACTGTGGAGTATGCATGGGGAAATATTTCTGTGCTACATGCAAATTCTTCGATGATGATATATCGAAGAACCAATACCATTGTGATGAATGTGGCATCTGCAGAACTGGAGGCAAGGAAAACTTTTTTCATTGCAAGAGATGTGGATGTTGCTACTCTAAGGTTATGAAAGATGGGCACCGTTGCGTGGAAAAAGCAATGCATCACAATTGCCCGGTTTGCTTTGAGTACCTTTTTGAGACGTTGAGAGATATTACTGTCTTACCTTGCGGGCATACCATACATTTGGACTGTGTTAAAGAGATGGAGAAACATTATAGGTATTCATGTCCTGTTTGTTCCAAATCCATCCGTGACATGTCAAGTTCGTGGAAGAAGCTTGACCAAGTGATTGCCTCAACTCCAATGCCTGAAACCTACAAAGATAAGCTGGTATGGATACTCTGCAATGACTGCGGAGCAAACTGTGAAGTGCAATTTCACATCGTGGCGCACAAGTGCCAAAGTTGTAATTCATACAACACACGCCAGATACGAGGAAGTCCTGCTAGTGCTACCTCATGCTCAGTGGCTGAGATGGTTCACTGCCACGACAATGAGAAGAGGGCAGAAAGCTTGCTTAAAAAATTAGGCAAAATTGCCCAAGTCTGTACATA 986 0.4351 MVLKKSILQSSLEVAKTEIPSLSDASPFNPQRLSSVDHGLGNFGCAHYKRRCKIRAPCCNEVFDCRHCHNEAKNSDEINPLDHHDIPRHQVKKVICSLCETEQDVQQYCVNCGVCMGKYFCATCKFFDDDISKNQYHCDECGICRTGGKENFFHCKRCGCCYSKVMKDGHRCVEKAMHHNCPVCFEYLFETLRDITVLPCGHTIHLDCVKEMEKHYRYSCPVCSKSIRDMSSSWKKLDQVIASTPMPETYKDKLVWILCNDCGANCEVQFHIVAHKCQSCNSYNTRQIRGSPASATSCSVAEMVHCHDNEKRAESLLKKLGKIAQVCT 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02342 328 SUPERFAMILY RING/U-box 180 230 - -
Bva07g02342 328 ProSiteProfiles Zinc finger CTCHY-type profile. 116 180 IPR017921 -
Bva07g02342 328 Pfam Zinc-ribbon 229 286 IPR039512 -
Bva07g02342 328 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 31 302 - -
Bva07g02342 328 SUPERFAMILY Zinc hairpin stack 117 174 IPR037275 -
Bva07g02342 328 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 162 253 IPR013083 -
Bva07g02342 328 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RZFP34 31 302 - -
Bva07g02342 328 Gene3D - 254 295 - -
Bva07g02342 328 ProSiteProfiles Zinc finger RING-type profile. 181 224 IPR001841 -
Bva07g02342 328 SMART ring_2 181 223 IPR001841 -
Bva07g02342 328 Pfam Ring finger domain 180 223 IPR001841 -
Bva07g02342 328 SUPERFAMILY CHY zinc finger-like 42 116 IPR037274 GO:0008270
Bva07g02342 328 ProSiteProfiles Zinc finger CHY-type profile. 38 114 IPR008913 GO:0008270
Bva07g02342 328 Pfam CHY zinc finger 45 126 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02342 Bva-Chr7 19139674 19143179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02342 43 290 C2H2 Transcription Factor Family AT3G18290 39.526 4.44e-55 191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02342 07 19139674 19143179 Bva07g02342 07 19139674 19143179 ECH