Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02331 atggCTATTGCCGGTCTGCACAATGTTTCTGTGCTTGATTCTTCTTTCCTTAGGGACTCCCATTCTCAATCATCGAGGAGGAGAGGAGATGGAGTGAGGGGAAGCACCCGGTCATCTTCACTCTTGCAAATGTGGCGAGAGATTGAAGATGAACATGCGGTGAGTCAAGCTCAAGGAAGACCTGGTGAGGGATTGCTACAACAAAGGAGTGATAGGTTGATGGATGGCCTCTCACAGGAAAATACACCAGATAGCCGTGAAAGAGAACAAAGGCATCTTCTAGAAGATGCAGTTTTCGGTGAGAATGAGTGCGAAACATGGTCGCAAACACAAAGTCAGAATGGGTCCCATGACGAACAGGAGGAATCAAACAATTCTAGTTGTGAAAACTCTTCTGAGTTTGGAGAAGTTGAAAGGGAAAGAGTGAGGCAAATTTTCAGGGAATGGATGAATAGTGGTGCTAGGGATAATGCATCAAGCATTTCACGAAGAAATAACAGATCAAGGGCAGAATGGCTTGGTGAAACTGAGCAGGAGAGGGTGAGAGTCATAAGGGAGTGGGTACAAATGAGTAGCCAGCAGAGAGATGTTTCTTCTGGGGACTACAGAGAAGAACAACCAGCTGAAATAGGTACCCAAATTGAACGTGTTCGTGACGGATATATTGTCAATCAGAGTGAGGGCCAAGCTGAGCATATAAGGAGGGGTATTCGTAAATTATGTGGCAGACAAGTTCTGCTAGATATGCTTAAGAAGGCTCAGAGGGAAAGGCAAAGAGAAGTTCAAGAATTATTGGAGCACCATGCTGTATCCAATTTCCCTCATCGCAACCGCATTCAGGCATTGCTACGGGGAAGGTTCTTGAGAAATGATAGATTGGTTGATAATAACAGGTCCACTTCAATTGCAGAAAGTGAACTAGGCTTATTGAGGCTGAAACAGACTGTTTCTGGTCTGAGGGAAGGATTCTTCTCCAGAAAGGATAGTTCTTGCTGCAGCCAAACAACCAGCAATGGTGATGTTGATGCTAATACAAATGAACAAGCTGAAGCCAGCAGTTCACAGGGGGTCCCAACTGTATGTTCTGAACAGTCTGAGCCTGTTAACCTTGGAGGTGAAGGTGCCAGACTTGGGTCATCAGGTGGACCAAGTTATTTACAAGGAACCACAAGTGCAAGTTTTGATTGGCAGGACTCAGACTCTAATGCTCATTTAGAAGGAGGGCGGCAATTTCTTCAGGAAATTGATTCAAGAGATTGTCAATCATCATCCAGTGTTGAGATTGAAAGAAGAGATGGCACTGAACAAAATGTTGATGGGACACCAGCAGAATATATTGATGATGGATCTGCTCAACAAACTTTGCAAGCTGAAGATCGAGTACAAAGCGATATGCAAGAATTTACTGAGGCACATAACGAACAATCTGAGCTAGGTGATATTGGTAATGTTGATAACAACTTTTCAAATCATAGCAGTCATATGGAGGACAATATGGTTGGTGTAAATTGGGATGAATCTGCTGCTCTAGAAGTTGAGCTGCAGGGAGaagttattgaaaatgaaggaaacGATCGGCAACAAACTAATGTTGAATGGAGAAATAGTACTGTGGAAAGTATGGATGACAGTCAGCCCAGTGAATGGCCCCAACAAGTCTTGGGGAATGAGGATGAGGAAAACTCTCATGTGCAAGAAGCCCCTGAAATGTGGCAAGAAGATGGCGGCTTTCAGGAGGCTGTGGAGAATTGGTTGGGAGGACCTTCTGATCATGAAGGTGCTCCAGCTGGTAGAATTCATGGATATTATTTTCCTGATGATGACAATGTGTACAGTGTGGAACTTAGGGAACTGCTAAATAGGAGAAGTGTCTCTAACCTCCTTGGAAGCAGTTTCCGTGAGAGTCTTGATCAGTTGATACAATCATATGTTGAAAGGCAAGGTCATGCTCATGTTGAGTGGGAGCTGCAAGAGACAACCCCCTCTTCTGCCTCGGTAGAGCAAGAATTAGAGCGGCAGGGTAGGGATCGGATTGTTGGTCAGGGGGAAGCTGTTAACAGTCCCATTGATCTACCCTCACCACCAACACCTTCTCATCAGACTCTTTGGGAACGGCGGTCACGTCATGACAGCTGGCCGCAGAATGATGAGTGGGAGATTATTAATGATTTGAGGATTGACATGGCTAGGCTACAGCAGAGGATGAACAATATGCAGAGGATGCTCGAGGCCTGTATGGATATGCAGCTTGAGTTGCAGCGCTCGATAAGACAAGAAGTTTCTGCAGCTCTAAATCGTTCAACTGGTTCATCAGAAATGCATGACTATGAATCGCCGGATGATAAATCTAAGTGGGATTGTGTGAGAAAAGGACTTTGCTGCATCTGCTGTGAAAGCAATATCGATTCCTTGTTGTACAGATGTGGGCACATGTGCACATGTTCAAAGTGTGCAAATGAATTGTTCCATAGTAGAAGAAAGTGCCCAATGTGTCAAGCACCTGTGGTGGAGGTACTTTTTTCCCCCCCTTGTTTTGTGCCgtg 2543 0.4444 MAIAGLHNVSVLDSSFLRDSHSQSSRRRGDGVRGSTRSSSLLQMWREIEDEHAVSQAQGRPGEGLLQQRSDRLMDGLSQENTPDSREREQRHLLEDAVFGENECETWSQTQSQNGSHDEQEESNNSSCENSSEFGEVERERVRQIFREWMNSGARDNASSISRRNNRSRAEWLGETEQERVRVIREWVQMSSQQRDVSSGDYREEQPAEIGTQIERVRDGYIVNQSEGQAEHIRRGIRKLCGRQVLLDMLKKAQRERQREVQELLEHHAVSNFPHRNRIQALLRGRFLRNDRLVDNNRSTSIAESELGLLRLKQTVSGLREGFFSRKDSSCCSQTTSNGDVDANTNEQAEASSSQGVPTVCSEQSEPVNLGGEGARLGSSGGPSYLQGTTSASFDWQDSDSNAHLEGGRQFLQEIDSRDCQSSSSVEIERRDGTEQNVDGTPAEYIDDGSAQQTLQAEDRVQSDMQEFTEAHNEQSELGDIGNVDNNFSNHSSHMEDNMVGVNWDESAALEVELQGEVIENEGNDRQQTNVEWRNSTVESMDDSQPSEWPQQVLGNEDEENSHVQEAPEMWQEDGGFQEAVENWLGGPSDHEGAPAGRIHGYYFPDDDNVYSVELRELLNRRSVSNLLGSSFRESLDQLIQSYVERQGHAHVEWELQETTPSSASVEQELERQGRDRIVGQGEAVNSPIDLPSPPTPSHQTLWERRSRHDSWPQNDEWEIINDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSTGSSEMHDYESPDDKSKWDCVRKGLCCICCESNIDSLLYRCGHMCTCSKCANELFHSRRKCPMCQAPVVEVIHVYSIQ 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02331 845 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 845 - -
Bva07g02331 845 Pfam Zinc finger, C3HC4 type (RING finger) 790 837 - -
Bva07g02331 845 MobiDBLite consensus disorder prediction 104 132 - -
Bva07g02331 845 SUPERFAMILY RING/U-box 792 838 - -
Bva07g02331 845 MobiDBLite consensus disorder prediction 684 708 - -
Bva07g02331 845 MobiDBLite consensus disorder prediction 423 437 - -
Bva07g02331 845 Coils Coil 243 263 - -
Bva07g02331 845 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 769 843 IPR013083 -
Bva07g02331 845 MobiDBLite consensus disorder prediction 327 366 - -
Bva07g02331 845 MobiDBLite consensus disorder prediction 416 442 - -
Bva07g02331 845 ProSiteProfiles Zinc finger RING-type profile. 793 832 IPR001841 -
Bva07g02331 845 MobiDBLite consensus disorder prediction 104 136 - -
Bva07g02331 845 Coils Coil 721 748 - -
Bva07g02331 845 MobiDBLite consensus disorder prediction 17 38 - -
Bva07g02331 845 PANTHER PROTEIN, PUTATIVE-RELATED 1 845 - -
Bva07g02331 845 MobiDBLite consensus disorder prediction 326 390 - -
Bva07g02331 845 CDD mRING-HC-C3HC5_NEU1 793 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02331 Bva-Chr7 19089811 19094449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02331 793 841 C3H Transcription Factor Family AT3G06140 38.776 3.17e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02331 - - gmx:100801329 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00315 09 1637799 1642400 Bva07g02331 07 19089811 19094449 BWGD
Bva07g02331 07 19089811 19094449 Bva07g02331 07 19089811 19094449 ECH
Bva09g00315 09 1637799 1642400 Bva07g02331 07 19089811 19094449 ECH