Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02330 ATGGAGCTCAACAACCGGCGACTACTCCTGCTCAACGACGACATACCCGCCTCCACCGTATCTCCTATCCCTTTCATCCAAACAAACGACACAGAATCCACCACAACCAATAACTCATACTCACAACCGCCATTAAGATTGCCGCCGCGTCCAGTTTTGGATGCCAACGTTGCTTATACCATGCTTGTCCTCCTCACCGCTCTCTTCTTCTTGGGCTTCGTTGCCATCTACATCCGTCGCTTCGGTGAGGACTCCGCCGTTCTAGTCTCATCCCAACGACGCCGCCGCCGCAACTATCCATCATCTCCCTCGTCTTGGAATCATTATTCCACGTCAGGGTGCTGTGGAGGTTTGGACCTCCATACCATCCGGTCCCTGCCGGTGTTTAAGTACCACCGCGATGTTAAGCAACCGCAACTTGACTGTGCGATTTGTCTAAGCGAGTTTCAAGAGGGTGAAGCCCTTAAGGTGATTCCATACTGTGAGCACGTGTTTCATCCTGAATGTATAGATATGTGGCTCGCCTCGAATGTGACGTGTCCGGTTTGCCGGTCCAAAAAGTTTCTTCAAATGAAACGAGATGATGATGGAGGTCTGGGTACCATAGACAAGAAAGGAGATCGGGGTCGGGGTGGGAGTACCTCTCAACAAGGATCGACGGTCGAGAATCGTGTAAAGTTGAAACATGACGGACAGGCAGGGTCACATAGTGAACGCAGAACTAGTAATTGTTTCAGCTTAGAAGGAGGTAGACTTGTCTTTCGGAGAACATTGAGTATCTG 782 0.5038 MELNNRRLLLLNDDIPASTVSPIPFIQTNDTESTTTNNSYSQPPLRLPPRPVLDANVAYTMLVLLTALFFLGFVAIYIRRFGEDSAVLVSSQRRRRRNYPSSPSSWNHYSTSGCCGGLDLHTIRSLPVFKYHRDVKQPQLDCAICLSEFQEGEALKVIPYCEHVFHPECIDMWLASNVTCPVCRSKKFLQMKRDDDGGLGTIDKKGDRGRGGSTSQQGSTVENRVKLKHDGQAGSHSERRTSNCFSLEGGRLVFRRTLSI 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02330 260 CDD RING-H2_EL5_like 141 184 - -
Bva07g02330 260 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL6 56 201 - -
Bva07g02330 260 PANTHER RING FINGER DOMAIN-CONTAINING 56 201 - -
Bva07g02330 260 MobiDBLite consensus disorder prediction 199 242 - -
Bva07g02330 260 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
Bva07g02330 260 Pfam Ring finger domain 141 184 IPR001841 -
Bva07g02330 260 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 191 IPR013083 -
Bva07g02330 260 SMART ring_2 142 183 IPR001841 -
Bva07g02330 260 SUPERFAMILY RING/U-box 122 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02330 Bva-Chr7 19088452 19089597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02330 52 199 C3H Transcription Factor Family AT2G27940 45.161 7.13e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02330 - K10664 vvi:100248267 161.77